Carettochelys insculpta (pitted-shelled turtle): 142024083
Help
Entry
142024083 CDS
T11194
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
ciz
Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
142024083 (NOTCH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_4
Ank_3
Ank_5
EGF_3
Gurken_M
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
142024083
NCBI-ProteinID:
XP_074871853
LinkDB
All DBs
Position
21:19025132..19116009
Genome browser
AA seq
2604 aa
AA seq
DB search
MPAGWLGAPRDRCGSEWRAQEQRPERRPRGARGEGMQQLLVRSLLLTLLPALSRGLQCPQ
SGEFCLNGGKCETYSNGTAVCLCSSAYVGDRCQLPNPCLSSPCKNAGTCHPVVHGNAVDY
TCSCRLGFTDRLCLTPEENACLSNPCRNGGTCDLLALTEFKCRCPPGWSGKTCQQADPCA
SNPCANGGQCVPFEAHYVCKCTAGFHGANCKQDLNECNNIPPICKNGGSCTNEIGTYQCS
CKPAYTGQNCEHLYVPCNPSPCQNGGTCRQTSDTTYDCTCLPGFAGQNCEDNIDDCPGNN
CKNGGTCVDGVNTYNCQCLPEWTGQYCTEDVDECQLMPNACQNGGTCHNTIGSYNCVCVN
GWTGEDCSENIDDCAMAACFQGATCHDRVASFYCECPHGRTGLLCHLDDACISNPCNEGS
NCDTNPVNGKAICTCPSGYTGPACNQDIDECSLGANPCEHAGKCINTQGSFQCQCLQGYA
GPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMPGYEGVYCEINTDECASSPCLHNGNC
IDKINEFHCECPTGFNGHVCQHDIDECASTPCKNGAKCIDGPNVYTCECAEGFAGAHCEI
DINECNPDPCHYGTCRDGIAAFTCLCQPGYTGHRCDININECQSQPCRNGGTCQDRNNAY
HCLCLKGTTGPNCEINLDDCASNPCDYGKCLDKINGYECTCEPGYTGRMCNVNIDECASN
PCHNGGTCEDGINGFKCICPEGYHDPMCVLEVNECNSNPCIHGKCNDGLNGYRCDCDPGW
SGTNCDINNNECESNPCMNGGTCKDMTSGYICTCREGFSGPNCQTNINECASNPCLNQGT
CIDDVAGYKCNCLLPYTGATCEDVLAPCAAGPCKNGGECQESEDYESFSCVCPSGWQGQT
CEIDINECVKNPCRNGATCQNTNGSYRCDCKAGYSGRNCDTDVDDCKPNPCHNGGSCSDS
VNAFFCECLAGFRGPKCEEDINECASNPCKNGANCTDCVNSYTCTCPSGFSGIHCENNTP
DCTESSCFNGGTCVDGINTFTCVCPPGFTGSYCEHDINECDSKPCLNGGTCQDSYGTYKC
TCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNLYRCECNSGWTGLYCDVPSVSCDVAA
KQQGVEVAHLCRNSGLCVDTGNTHFCRCQAGYTGSYCEEQVDECSPNPCQNGATCTDYLG
GYSCECVAGYHGVNCSEEINECLSHPCQNGGTCIDLINTYKCSCPRGTQARSTMAPQSTT
GALGHERDTKMHQTHCASLSPGVHCEINVDDCSPFFDPVTLGPKCFNNGKCIDRVGGYSC
ICPPGFVGERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRQGYTGRRCDTVVDGCKG
KPCRNGGTCAVASNTGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCM
CAPAFTGPDCQAPVSNPCSSNPCYNKGTCELVGESPPYYRCNCPANFNGLYCHILDFDFR
GGIGQDIVPPTIEEKCEIAVCESYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQS
LQCWKYFNDGKCDVQCSNAGCLYDGFDCQKVDGQCNPLYDQYCKDHFSDGHCDQGCNNAE
CEWDGLDCANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNLKGE
YMIFPYYGNEEELKKHHIKRSTENWSDMPSAVFNTVRTSLPSRIGGRQRRELDQMDVRGS
IVYLEIDNRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPPGNSQL
YPMYVVVAALVLLAFVGVGVVVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGL
KPLKNASDGTLMDDNQNEWGDEETLDTKKFRFEEQVMLPDADDQTDHRQWTQQHLDAADL
RISSMAPTPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDF
IYQGASLHSQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADA
QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINCHADVNAVDDLGKSALH
WAAAVNNVEAAMVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHM
DRLPRDIAQERMHHDIVRLLDEYNLVRSPPLHNGPLGAPTLSPPLCSPNSYIGNLKPTVQ
GKKARKPSTKGLSCSGKDSKDIKARRKKSQDGKGCLLDSASVLSPVDSLESPHGYLSDVA
SPPLMTSPFQQSPSVPLNHLPGMPDAHMSINHLSMAGTQDLALGSSSRMAFDSVPPRLSH
LPVSSPGTVMSSAPMNFTVGGAAGLSGQCDWLKRLQNGMGQNQYNPMRSSVQPGAHQQAQ
ALPHGMMTSLHNGMPTTTLSQMMSYQPMPSTRLASQPHLMQAQQLQQIQQQQNLQQQLQQ
QNMQQQQHNNSSNASSHMSQNFLSNELSQSDMQQVSSSTMTVHTVVPQETQILATSLPSS
LAQPMTTTQFLTPPSQHSYSSPLDNTPNHQLQVPDHPFLTPSPESPDQWSSSSPHSNISD
WSEGISSPPTSMQSQIGHIPEAFK
NT seq
7815 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccggctggctgggggcgccccgggatcgatgcggctctgagtggagggcccag
gagcagcgcccggagagacgcccgcggggagctcgaggagaaggaatgcagcagcttctg
gtgcggagcctgctgctgacgctgctgcccgcgctgagccgaggtttacaatgtccacag
tctggtgaattctgcttgaacgggggaaagtgtgaaacttactccaatgggacggcagtc
tgcctatgcagcagcgcctacgtcggcgaccggtgccagctccccaacccctgcctcagc
tccccgtgcaagaatgccggcacctgccacccggtcgtccacggcaatgctgtggactac
acctgctcctgccgcctgggcttcaccgacaggctgtgcctgacgcccgaggagaacgcc
tgcctcagcaacccctgccgcaatggagggacctgcgacctgctcgcgctgacggagttc
aagtgccggtgccctccgggatggtcagggaagacctgccagcaggcagatccctgtgcc
tccaacccctgtgccaacggagggcagtgcgttccttttgaagcccattacgtctgcaag
tgcacagcgggcttccacggggccaactgcaagcaggacctgaacgagtgcaacaacatt
cctcccatctgcaagaacggcgggagctgcaccaatgaaatcgggacctaccagtgttcc
tgcaagccggcatacaccggccagaactgtgagcacctctatgtgccttgcaacccgtcg
ccctgccagaacgggggcacttgccgtcaaaccagcgacaccacctacgactgcacgtgt
cttccaggttttgctggtcagaactgcgaggacaacattgatgactgtcctggaaacaac
tgcaagaatggaggcacctgcgtggatggagttaacacctacaactgccagtgccttcct
gagtggacaggccagtactgcaccgaagatgtcgatgagtgccagctcatgcccaatgcc
tgccagaatggagggacgtgccacaacaccattggcagctacaactgtgtctgcgtcaac
ggctggaccggcgaggactgcagcgagaacattgacgactgcgccatggccgcctgcttc
cagggggccacctgccatgaccgagtggcctctttctactgcgagtgcccacatggccgc
acaggtttgctctgccacctggacgacgcctgcatcagtaacccctgcaacgaaggctcc
aactgtgacaccaacccagtcaacggcaaagccatctgcacctgcccttccggttacaca
gggccagcctgtaaccaagacatagacgagtgctcgctaggagccaacccttgtgagcat
gctgggaaatgcatcaacacccaagggtctttccagtgccagtgtctccagggctatgcg
ggcccccgctgtgagattgatgtcaatgaatgcctctcgaacccctgccagaacgacgcc
acctgcctggatcagattggagaattccagtgcatctgcatgccaggttacgagggcgtt
tactgtgaaatcaacaccgacgagtgtgccagcagcccctgcctgcacaatgggaactgc
atcgacaagatcaatgagttccactgcgagtgccccacaggctttaatgggcacgtctgt
cagcacgacatcgacgagtgcgccagcacaccgtgcaagaatggagcgaagtgcatcgac
ggccccaacgtctacacctgcgagtgcgccgaagggtttgctggcgctcactgcgaaatc
gacatcaacgaatgcaatcccgacccgtgccactatgggacctgcagggatggcatcgct
gccttcacctgtctgtgtcagcctggctacacaggccaccgctgtgacatcaacatcaac
gagtgtcagagccagccgtgcaggaatggcgggacttgccaggacaggaacaatgcctac
cactgcctctgcctcaaaggtaccacagggcccaactgcgaaatcaacctggacgactgt
gccagcaacccatgcgactatggcaagtgcctggacaagatcaatggctatgaatgcacc
tgtgagccaggatacacagggagaatgtgcaacgtcaacattgacgagtgtgccagcaac
ccgtgccacaatgggggaacctgcgaggacggcatcaacggcttcaagtgcatctgcccc
gagggataccacgaccccatgtgcgtgctggaagtgaacgagtgtaacagcaacccctgc
atccatgggaaatgcaatgacggcctcaatggctaccggtgtgattgtgacccgggctgg
agcggcacaaattgtgacatcaacaacaatgagtgtgaatcaaacccttgcatgaatgga
ggcacctgcaaagacatgaccagcggatacatctgtacctgccgggagggattcagtggg
cccaactgtcagaccaacatcaatgagtgtgcttccaacccttgcctgaatcagggaacc
tgcatagatgatgtagccggctacaaatgcaactgtctcctgccctatacaggggctacg
tgtgaggatgtgctggctccgtgcgcggctggcccgtgtaagaatggcggcgagtgccaa
gagtcagaggactacgagagcttctcctgtgtgtgcccctcaggctggcaaggtcaaacg
tgcgagattgacatcaacgagtgcgtgaaaaatccctgtcgaaacggcgccacgtgccag
aacacgaatggcagctaccgctgcgactgcaaagcgggctactccggccgcaactgtgac
accgacgtcgacgactgcaagccgaacccatgccataatgggggctcctgctccgacagc
gtcaatgccttcttttgcgaatgcctggctggcttccgggggccgaaatgcgaggaggac
atcaacgagtgcgccagcaacccctgcaagaacggggccaactgcacggactgtgtcaat
agctacacctgcacctgcccctccggcttcagcgggatccactgtgagaacaacacacct
gactgcacagaaagctcctgttttaacgggggaacgtgcgtggatggcatcaacaccttc
acctgcgtgtgtccacctggcttcacgggcagctactgcgagcacgacatcaacgagtgc
gactctaagccgtgtctgaatgggggcacctgccaggacagctacgggacctacaagtgc
acctgtccacaaggctacaccggcctcaactgccagaatctggtccgctggtgcgactcc
tctccctgcaaaaacggaggcaagtgctggcagaccaataacttgtaccgctgcgaatgc
aacagtggctggaccggcctgtactgtgatgtccccagtgtatcctgcgacgtggcggca
aagcagcaaggtgtcgaggtggcgcacctctgcaggaactctggcctctgtgttgacacc
ggcaacacgcacttctgtcgctgccaggccggctacaccggcagctactgcgaggagcag
gtggacgagtgttccccaaacccctgccagaatggggctacgtgcacggactacctggga
ggctactcctgtgagtgcgttgctggctaccacggtgttaattgctcagaggagatcaat
gagtgcctgtctcacccgtgccagaatggaggaacctgcattgatctcatcaacacctac
aaatgctcttgccccagagggactcaagcacgcagcacaatggcgcctcaatccacaacc
ggagccctaggtcacgagagggacacaaaaatgcatcagacgcactgtgcctcactgtcc
ccaggggtgcactgtgaaatcaacgttgacgactgcagccctttctttgatcctgtcact
ctggggcccaagtgcttcaacaacggcaaatgcatcgaccgggtgggcggctacagctgc
atctgcccgcccggcttcgtgggggagcgctgcgagggagacgtcaatgaatgcctctcc
aacccgtgcgacgcacgcgggacccagaactgcgtgcagcgcgtcaacgactacaagtgc
gagtgcaggcagggctacacaggccgtcgctgtgacaccgtggtggatggctgtaagggc
aagccctgccggaacggcggaacctgtgcagttgctagcaacactggccgtggcttcatc
tgtaaatgccccccgggctttgttggggccacttgcgaaaacgactcgcgcacctgcggg
aacctgcactgcctgaatggcggcacctgcatctccatccataagagctccaagtgcatg
tgcgctccggccttcacgggacccgactgccaggcccccgtcagcaacccctgcagctcc
aacccctgttacaacaagggcacctgtgagctcgtcggtgagtctcccccctattaccgc
tgcaactgccctgcaaacttcaacggcctctactgccacatcctggacttcgacttccgg
ggcggcatcggccaggacatcgtcccgcccaccatcgaggagaaatgcgagatcgccgtc
tgcgagagttacgccggcaacaagatctgtgacgggaagtgcaacaaccacgcctgcggc
tgggacggtggcgactgctccctcaacttcaacgacccctggaagaactgctcgcagtcg
ctgcagtgctggaagtacttcaacgacgggaagtgcgacgtgcagtgcagcaatgccggg
tgcctgtacgacggcttcgactgccagaaggtggacgggcagtgcaatcctctgtatgac
cagtactgtaaagatcacttttcagacggtcactgcgaccaggggtgtaacaacgctgag
tgtgaatgggatggcctggactgtgccaacaacatgcctgagaaacttgcagacggcacc
ttggttgtggtagtcctgataacccccgagaacctgaagaacaactccttcaacttcctc
cgggagctcagccgtgtccttcacaccaatgtggtcttcaagaagaacctcaagggagag
tacatgatcttcccgtactatgggaatgaagaggagctgaaaaagcaccacatcaagagg
tcgacggagaactggtcggacatgcccagtgctgtcttcaacacagtcaggacatccctc
ccatcacgcattggtggaagacagcggagagagctggatcagatggacgtcagagggtcc
atcgtctacctggaaatcgacaaccgccagtgcatccagtcctcttcacaatgtttccag
agtgcaactgacgtggcggctttcctgggtgccctggcctcgcttggtaacctgaacatc
ccctacaaaatagaagccgttaaaagtgaaacagctgagccccctgggaactcccagctg
tatcctatgtatgtggtggtggctgccctggtcttgcttgctttcgtcggagtgggagta
gtggtctctcgaaagagacgccgggagcatgggcagctctggttcccagaaggtttcaaa
gtgacagagtcaagcaagaagaagcgacgagaaccacttggggaggattctgtcggactg
aaacccctaaaaaatgcttccgatggcactttgatggacgacaaccagaatgaatggggt
gatgaagagaccttggacaccaagaagttccggtttgaggagcaggtgatgctgccagat
gcggacgatcagacagatcacaggcagtggactcaacagcacctagacgcagctgacctt
cgcatctcctccatggcccccaccccaccacaaggcgaaattgatgctgattgcatggat
gtcaacgttcgaggtcctgacggattcaccccgctcatgattgcttcgtgcagtggagga
gggctggagactggcaacagcgaagaggaggaggatgcccctgctgtcatctcagacttc
atctaccagggcgccagcttgcacagccagacagaccggaccggcgagacagcgctccac
ctggctgcaaggtactctcgctccgatgccgccaaacgcctgctggaggccagtgcagat
gcaaacatccaggacaacatgggcaggacgcccctccatgcagctgtctcagctgatgct
caaggagtcttccagatcctgattaggaacagagcaaccgatttggatgcccgcatgcac
gatgggaccacgccgctgatcttggcagctcgcttggccgtcgagggcatgttggaggac
ctgatcaattgccacgcagacgtcaacgcggtggatgacctgggcaaatcagccctgcac
tgggccgctgctgtgaataatgtcgaagccgccatggtgctgctgaagaatggtgccaat
aaagatatgcagaacaacaaggaggagaccccattgttcctggcagccagagaagggagc
tatgaaactgcgaaggtccttctggatcactttgcaaaccgggacataaccgaccacatg
gatcggctcccgcgggacatcgcgcaggagcgcatgcaccacgacatcgtgcggctgctg
gatgagtataacctggtccggagcccaccgctgcataatggccccctgggggcacctacg
ctgtctccccccctctgctcacccaacagctacatcggcaacttgaagcccactgtgcag
gggaagaaagcgaggaaaccaagtaccaaggggctgagctgcagcggcaaagattccaaa
gacatcaaagccaggaggaaaaaatcgcaggatgggaaaggttgtctgctggacagcgcc
agcgtgctgtcacctgttgactccctggagtcaccccacgggtacttgtcagatgttgct
tctcctccactgatgacgtctccctttcagcagtccccttctgtgcctctgaaccacctg
ccgggcatgcctgacgcccacatgagcatcaaccatctcagcatggcaggcacgcaggat
ctggccctgggcagctccagcaggatggcctttgattcagtgcccccgcgtctctcccac
cttcccgtctccagccccggcaccgtcatgagcagcgccccaatgaatttcacggtcggc
ggagctgccggcctgagcgggcagtgcgactggctcaagaggctgcagaacgggatgggt
cagaaccagtataacccgatgagaagcagcgtccagcccggagcacaccagcaagcccaa
gcccttccccatggcatgatgacctccctgcacaatggcatgcccaccacgactctgtca
cagatgatgagctaccagcccatgccgagtaccaggctggcctcccagccacacctgatg
caggcccagcagctgcagcagatccaacagcagcagaatttacagcagcagctgcaacag
caaaacatgcagcagcagcagcacaataacagctcgaacgccagcagccacatgagccaa
aatttcctcagtaacgagctgagccagtcagacatgcagcaggtgagcagcagcaccatg
accgtgcacaccgttgtgcctcaggagacccagatcctagcaacgtctctgccgtcctcc
ctcgcgcaacccatgaccaccacccagtttttaactccgccctctcaacacagttactcc
tcccccttggacaatacacccaaccaccagcttcaggtgccagaccacccttttttaacg
ccttcccccgagtcaccagaccaatggtcaagctcgtcacctcattctaacatatctgat
tggtcagaggggatctccagccctcccacaagtatgcagtcacagataggacacatccca
gaagccttcaagtaa
DBGET
integrated database retrieval system
