Carettochelys insculpta (pitted-shelled turtle): 142024103
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Entry
142024103 CDS
T11194
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04510
Focal adhesion
ciz04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142024103 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142024103 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ciz00536
]
142024103 (TNC)
Glycosaminoglycan binding proteins [BR:
ciz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
142024103 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142024103
NCBI-ProteinID:
XP_074871911
LinkDB
All DBs
Position
21:7993611..8097381
Genome browser
AA seq
2434 aa
AA seq
DB search
MGLPMLVLTCAIIALLHQHVNGGLIKRIIRQKRDTGVNVTLPEENQSVVFNHIYNINVPM
GSLCSVDLDSANGDTDLKPQIEPSKTYQEHTVNEGNQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLREQCSSSAGCCPSGQTAEGQVDTTPYCNGRGNYSTELCGCICEP
GWKGPNCSEPECLNNCNNKGRCVNGKCICDEGFTGEDCSQLTCPNDCSDQGKCIDGVCLC
FEEYTGKDCSEEICPGACSEHGKCVDGRCVCDEGFTGEDCSEPLCLNNCNNHGRCVEKEC
VCNEGYTGEDCGELICPNDCYDRGRCVNGTCYCEEGFTGEDCGKRTCPNNCNNRGRCENG
LCICNEGFVGDDCSERRCPKDCNKRGRCINGKCLCNEGFAGAACGQVKCPKDCNNRGRCV
NGQCVCQEGFVGEDCSELRCPNDCSNRGRCINGQCECDEGFMGEECSQLKCPNDCHNRGR
CINGQCVCNEGFIGEDCGELRCLSDCNNRGHCLNGQCVCEEGFTGEDCGELRCPHDCNGH
GRCISGQCVCDEGYMGDDCAELRCPNDCNNHGRCVDGRCVCDEAFTGENCGELVCLNNCN
NRGRCINGQCECDHGYTAIDCSQQRCPSDCNNRGRCVDGQCLCDEGFGGPDCSERTCLNN
CNDLGRCVDGQCICDEGYEGDDCSSVSPPSDLTVTDVTDKTVNLEWKNENLVNEYLITYV
PTSVGGLELQFSVPGNETSATIQELEPGVEYFIRVFAILKNKKSIPISARVATYLPTPEG
LTFKSIKETSVQVEWDPLNISFDGWELIFRNTKKEDNGDITNSLKRPQTSYMQPGLAPGQ
EYNVSLHIVKNKTRGPGLFRVITTKLDAPSQIEARDVTDTTALITWFKPLAEIDDMELSY
GPKDVPGDRTTIDLSEDESQYSIGNLKPHTEYEVTLISRRGNMVSDPAKETFVTDLDAPK
NLKRLSQTDNSITLEWKNSHASIDNYRIKFAPISGGDHAEITVPRSNQATTKVTLTGLRP
GTEYGIGVTAVKQDRESLPTTINAATDLDNPKDLEVNDRTETTLSLRWKRPLAKFDRYRL
IYIIPSGRKNEIEIPADSTSYILRELEAGTEYTISLIAEKGRHKGKPTVVKESTATPSLD
LKWEATPGPDEYSGSWSSEASGMGEDSLRDVVVSNMTAHGFSLSWKVDLGVYTSFVVEYK
KVDLAAGPLAEVFIPGNSLGTVIDGLQANTSYKIKVYGMTGGQRSHPLEAVATTAHLVTT
SGESASETTFNPTSPAPTEISDLANPTTDFLTLFSVPTDFSILEASAQIHNLKITDRTFN
SFTLSWAVQDALFDKFLITLKSLPSLNKTQEILVPGNLRETEFTNLIAGTQYLINLRGST
QGQLSRSLDAIAATEEEPELGKLTVSKVSWDGFQLNWTAADGAYENFVIQVWESSNPEEA
RNLTVPGTLHFVNVTGLKAHMPYTVILYGVIRGYKTKPLSVNTTTATVPEVGELTVSSIT
PESFNLSWTAPEEAFTTFTIEIIDSSRLQEPMEYNISGNLRTAHISGLSPKTDFIVYLYG
STRGFRTKAISAAATTVEEPLLSKLTVSNATSDSVSLTWEAQDDAFDRFVLEVRNSDLPL
DSLVHTAPGDSRSFVITNLRAATNYTVQLRGLVDGQGAQTLTALVTTESKPQLGTLTLTN
VTPDSFNLSWTTQDGPFAKFVINVRDSYSAHEPQELTVPGGARSAHISGLVDYTGYDINI
QGTTHAGVGTEPLTAFVMTESMPSLENLTVSNINPYGFMVSWMASENAFDNFLVIVVDSG
KLLDPQEFLLTGDQRHLELKGLITGIGYEVMLYGFAKGRQTKPLNTVAITEAEPEVDNLL
VSDATPDGFRLSWTADDGVFDSFVLKIRDTDRQSDPRELIVPGHERTQDISGLKEGTKYD
IELYGVISGRRSQPINAVATTAVGSPKAITFSDVTENSAMVSWTPPRTRVESFRISYVPV
TGGTPNVMTVDGTKTRTRLVKLIPGVSYTVSIISVKGFEESEPISGTLTTALDTPSGLVA
VNITDSEALAIWQPAIATVDNYIISYIAEDEPEVTQMVSGNTVEYDLNGLLPATEYTLRL
YAIKGPQKSETVFTKFTTGLDAPRDLSAIEVQSETAVLSWKPPRGSLTGYLLIYESVDGK
VKEVILDPEATFYSLSELSPSTQYTVKLQALNRDLKSKIIQTVFTTIGALYPYPRDCSQA
LLNGESASGLYTIYMNGDKSQPLEVYCDMTADGGGWIVFLRRHNGKENFYRNWRTYAAGF
GDPKDEFWIGLENLHKITSQGQYELRVDLQDKGETAYAIYDRFSVGDSKSRYRLKVDGYS
GTAGDSMTYHNGRSFSTFDKDNDAAITNCALSYKGAFWYKNCHRANLMGRYGDNSHSQGV
NWFHWKGHEYSIQFAEMKLRPSSFRNLEGRRKRA
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atggggcttcccatgctggttttgacctgtgccatcatagctctgctgcaccagcatgtc
aatggtgggctcatcaagagaattatccggcagaagcgggacacaggagtaaatgtgacc
ttaccagaagagaaccagtctgtggtttttaaccacatctacaacattaatgtacccatg
ggctcactctgttctgtggacttggactcagctaatggggacacagacctgaagccccag
atagagccaagcaagacctaccaggagcataccgtgaatgaggggaaccagatagtcttc
acacatcgcatcaacatcccccgccgggcttgtggctgtgcagctgctccagacatcaag
gatctgctgagccgtctagaggaactggaggggctggtatcctctctacgagagcagtgc
tccagcagtgctggctgctgtcccagtggccaaacagcagaaggtcaagtggataccaca
ccttattgcaatggacgagggaactacagtactgagctctgtggctgcatttgtgaacct
ggctggaaaggacccaattgctcagaacccgaatgcctgaacaattgcaacaacaaaggc
cgctgtgtcaatggcaaatgcatctgtgatgaaggcttcactggtgaggactgcagccag
ctgacttgccccaatgactgcagtgaccaaggcaaatgcatcgatggtgtgtgtctgtgc
tttgaggagtacactggcaaggactgcagtgaagagatttgcccaggggcatgcagcgag
catggaaagtgtgtggatgggaggtgtgtgtgtgatgaaggtttcactggtgaggactgc
agcgagccgctctgcctgaacaactgcaataaccatggccgctgtgtggagaaagagtgt
gtctgcaatgaaggctacacgggtgaagactgtggtgagcttatctgccccaatgactgc
tatgaccgtggacgctgtgtcaatgggacatgctactgtgaggagggcttcaccggggag
gactgtgggaagcggacctgccccaacaactgcaataacagaggtcgctgcgagaatggg
ctgtgcatctgtaatgaaggctttgtgggagatgactgtagtgaacggcgatgccccaag
gactgtaataagcggggacgctgcatcaatgggaaatgcctgtgtaatgagggctttgct
ggtgcagcttgtggccaagtgaagtgccccaaagactgtaacaaccggggccgctgtgtc
aatgggcagtgtgtgtgccaggagggcttcgtgggtgaagactgcagcgagttgcggtgt
cccaatgactgtagcaaccgagggcgctgcatcaacgggcagtgcgagtgtgatgagggc
ttcatgggtgaggaatgcagccagctgaagtgccccaatgactgtcacaaccgcgggcgt
tgcatcaacgggcagtgcgtgtgcaacgagggcttcatcggggaggactgcggggagctg
aggtgcctcagtgactgtaacaaccgggggcactgcctcaatgggcagtgcgtgtgtgaa
gagggcttcacgggtgaagactgcggggagctgaggtgccctcacgactgtaacgggcat
gggcgctgcatcagtgggcagtgcgtgtgtgatgaaggatacatgggggatgactgtgct
gagctgaggtgccccaatgactgcaacaaccatggccgttgcgtggatgggaggtgtgtg
tgtgatgaggccttcactggagagaactgcggggaactggtgtgtttgaacaactgcaac
aaccggggtcgctgcatcaatgggcagtgcgaatgtgaccatggatacacagccatcgac
tgtagccagcagaggtgccccagcgactgcaacaaccgggggcgctgtgtcgacggacag
tgcctgtgcgatgagggctttggtggtccggactgcagcgagcgaacctgcctcaacaac
tgcaatgacctgggccgctgcgttgatgggcagtgcatttgtgatgagggatatgagggg
gacgactgctccagtgtgtcccctccaagtgacttgacagtgacagatgtgacagataag
actgtaaatctggaatggaagaatgagaatctagttaatgagtacctcatcacctatgtt
cctacgagtgttggtggcctagaactgcagttcagcgtgcctggaaatgagacatctgca
accatccaggaactggagcctggtgtggaatactttatccgtgtgtttgccatcctaaag
aataagaagagtattccaatcagcgccagagtggcaacctatctgcccactcctgaaggt
ctgacattcaaatccatcaaggagacatctgtgcaggtggaatgggatcctctgaacatt
tcttttgatggatgggagctcatcttccgaaacacaaaaaaggaggataacggggacata
accaacagcttgaagaggccacagacatcgtacatgcagccaggtctggcaccaggacaa
gagtataatgtatccctgcatatagtgaaaaacaaaaccagaggaccagggctgtttcga
gtgattactacaaaactggatgccccgagccagattgaagcaagagatgtgacagacacc
acagctttaatcacatggttcaaacctttggctgaaatcgatgacatggagctcagctat
ggacccaaagatgttccaggggacaggacaaccattgacctttctgaggatgaaagccaa
tattccattgggaatctcaagccacacacagagtatgaggtgacactgatatctcggcgt
gggaatatggtcagcgaccctgcgaaggagacctttgtcacagacttggatgcaccaaag
aacctgaagcgtctgtctcagacagacaacagtatcaccttagagtggaagaacagccac
gctagcattgataactacagaatcaagtttgctcccatctcaggtggagaccatgctgag
atcactgtgccaaggagtaatcaggccacaaccaaggttacgctcacaggtctcaggcca
ggaactgaatatggcattggagtgacagccgtgaagcaggacagagagagccttcctacg
accatcaatgctgcaaccgatctggataaccccaaggacttggaggtcaatgatcgcacc
gaaacaaccctctcactccgctggaaaagaccactggccaagttcgatcgctaccgcctc
atctacattattccctctgggaggaagaatgaaatcgagataccagcagacagcacttct
tacatcctgcgagagctggaagctggtacagaatataccatcagcctcatagcagagaag
ggcaggcacaagggcaaacccacagtagtgaaggagtctactgccacacctagtctagat
ctaaagtgggaggcaactcctggcccagatgagtactctggatcctggagctcggaggct
tcggggatgggggaggattcgctgagggatgtggtggtctccaatatgacggcgcatggc
tttagtctctcgtggaaggtggacttgggtgtctacactagttttgtggtggagtacaag
aaggtggacttggcagcggggcctctggcagaagtcttcatacccggaaactccttaggc
actgtgattgatggcctccaggctaacacatcctataaaatcaaggtgtacggaatgact
ggaggacaacgctcccatcctcttgaagctgtggctacaacagcccatctagtcacaact
tctggagaatcagccagtgaaacaacatttaatcctaccagtccagcacctactgaaata
agtgacttggcaaatccaaccactgattttctcactctgttttcagtgcccactgatttt
tccatcctggaagcctctgcccaaattcataatcttaaaataacagataggactttcaat
agtttcacactgtcctgggcagtgcaagatgcattatttgataagttccttatcactctg
aaaagtctgcccagtttaaacaaaacccaggaaatcttggtgccaggaaacctacgagaa
acagaatttaccaatctcatagctggcacacaatacctgattaatctccgtggaagcact
caaggccagctgtctcggtcattggatgcaatagctgctacagaggaggaacctgagctc
ggaaagttaacagtgtcgaaagttagctgggatggtttccaactcaactggacagcagca
gacggggcctatgagaactttgtcattcaggtgtgggagtctagcaacccagaagaagct
cggaatctcacagttccaggcacgctgcactttgtgaatgttactggtctcaaggctcac
atgccttacactgtcatcctttacggtgtgattcggggctacaagaccaaacccctttct
gttaacactacaacagcaacggtacccgaagttggtgaactaacggtttccagcattacc
cctgaaagcttcaacctttcctggacagccccggaggaggccttcacaacatttacaata
gaaattattgattctagcaggttacaggaacccatggagtataacatttcaggcaactta
aggactgctcacatctcagggctttccccaaaaactgattttattgtctacctctacggg
agcacacgtggtttccgcacaaaggcaataagtgctgcagctactacagtagaagaacct
ctccttagcaaactaactgtctcaaatgctacctcagacagtgtgtccctcacatgggaa
gctcaggatgatgcctttgaccgctttgttttagaagttagaaactctgacttgcctttg
gactccctggtgcacacagcgccaggggactcgcggagttttgtaatcaccaacctaaga
gctgccactaattacactgtccaactccgtggtctagttgatggccaaggtgctcagact
ttgactgctctggttaccacagagtccaagccacagctgggcacgctcacactcacaaac
gttacccccgacagcttcaacctctcatggaccacgcaagatgggccttttgcaaagttt
gttatcaatgttagagattcctattctgcccacgagcctcaggagcttacagtgcctgga
ggtgcccgcagcgctcacatctctggtttggtagattacactggctatgacattaacatt
cagggcaccacccacgcaggggtcggcacagagcccctcactgcttttgtcatgacagag
tccatgccctcactggaaaacctaactgtctctaacattaatccttatgggttcatggtg
tcctggatggcatcggagaatgcctttgacaactttctagtaatcgtggtggattctggc
aagctcctggacccacaggagttcctccttacaggagaccagcggcatctggagcttaag
ggccttattacaggcattggctatgaggttatgctttatggttttgccaaggggcgccaa
acaaagcccttaaacactgtggctattacagaagcagaacccgaggttgacaaccttctg
gtttcagatgccaccccagatggattccggctgtcctggaccgccgatgatggggtcttc
gacagctttgttcttaaaatcagggataccgacaggcagtctgaccctcgggaactaatt
gtgccaggccacgaacgcacccaggatatatcagggctgaaagagggtactaagtatgac
attgaactctatggagttatcagtggacgacgttcccagcccataaatgccgtagctacc
acagctgtgggatcaccaaaggcaatcactttttctgacgttacggagaactcagccatg
gtcagctggacacctcccaggacacgagtggagagcttccggatttcatatgtccctgta
acaggaggtactccaaatgttatgacagtggatgggaccaagactaggaccagactggtg
aaactgatcccaggtgtgtcctacactgttagtataatctcagtcaaaggatttgaagaa
agcgagcctatctctggaactctgaccacagctctggacaccccatcaggcctagtagca
gtgaatatcacagactctgaagcattggcaatctggcagccagcgattgccacagtggac
aattacatcatctcctacattgctgaagatgagccagaagttactcagatggtgtctggg
aacactgtggaatatgaccttaatggcctccttcctgcaactgaatataccctgcggcta
tatgcaataaagggaccccagaagagtgagacagtcttcaccaaattcactacaggtttg
gatgcgccaagagatttaagtgccattgaggttcagtcagaaacagcggtcctgtcatgg
aaacctccacgtgggtctctcactggctatctccttatttatgagtctgtcgatggcaaa
gtcaaggaagtcatcctggatcctgaggcaactttctacagcctgtctgagctcagccca
tccacccagtacacagtgaaactgcaggcactgaacagagatctgaagagcaagataatc
cagacagttttcacaacaattggagctctctatccttaccctagagactgctcccaagct
ctgctgaatggagaaagtgcctctggactttacaccatttatatgaatggagacaagtct
cagcccctcgaggtgtactgtgacatgaccgctgatggaggcggatggattgtgtttctg
aggcgccacaatggaaaggaaaacttctacaggaactggaggacttatgctgctgggttt
ggggatcccaaggatgaattctggattggtctggaaaacctccacaaaatcacttctcag
ggccaatatgagctgcgtgtggatctccaagacaagggtgagacagcatacgcaatctac
gacaggtttagcgtgggagactccaagagccgttatcggctaaaagtggatggatacagt
ggtacagcaggtgactccatgacctatcataatggacgatccttctccacctttgacaag
gacaatgatgctgccatcacaaactgtgcattgtcctacaaaggtgctttctggtacaag
aattgtcaccgagccaatctgatgggcagatatggagacaacagccatagtcagggtgtt
aactggttccactggaagggccatgaatactctatccagtttgcagaaatgaagttgaga
ccctccagcttccgaaatctagaagggagacgaaagagagcataa
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integrated database retrieval system
