Carettochelys insculpta (pitted-shelled turtle): 142024117
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Entry
142024117 CDS
T11194
Symbol
TLR4
Name
(RefSeq) toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04145
Phagosome
ciz04217
Necroptosis
ciz04620
Toll-like receptor signaling pathway
ciz04621
NOD-like receptor signaling pathway
ciz05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
142024117 (TLR4)
09143 Cell growth and death
04217 Necroptosis
142024117 (TLR4)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
142024117 (TLR4)
04621 NOD-like receptor signaling pathway
142024117 (TLR4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
142024117 (TLR4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ciz04131
]
142024117 (TLR4)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ciz04054
]
142024117 (TLR4)
04090 CD molecules [BR:
ciz04090
]
142024117 (TLR4)
00536 Glycosaminoglycan binding proteins [BR:
ciz00536
]
142024117 (TLR4)
Membrane trafficking [BR:
ciz04131
]
Endocytosis
Phagocytosis
Toll-like receptors
142024117 (TLR4)
Pattern recognition receptors [BR:
ciz04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
142024117 (TLR4)
CD molecules [BR:
ciz04090
]
Proteins
142024117 (TLR4)
Glycosaminoglycan binding proteins [BR:
ciz00536
]
Hyaluronan
Cell surface receptors
142024117 (TLR4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_NXF1-5
LRR_At5g56370
LRR_9
LRR_Zer-1
LRR_R13L1-DRL21
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
142024117
NCBI-ProteinID:
XP_074871953
LinkDB
All DBs
Position
21:complement(6223847..6234432)
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AA seq
810 aa
AA seq
DB search
MVGSFNPCVEVITNLTYSCMEMNLSGVPDEIPPSTENLDLSFNTLESLTSNYFSAVPALM
FLDLTRCDIQTIEDNAFVDLRYLLTLILTGNPLQHLGPSAFSGLESLQRLVAVEDDISSL
ADLPIGHLHTLEELNLGKNQVDSLKLPRYFSNLSALKLLNLQSNRISSISTGDLDALQGG
KGQNLTLVLSINEIKHIQPGSFEGVQLGELSLRSCFENSSIMKACIQGFAGLQVNRLVLG
EFRNIHPVSDFSNGLLDGLCQVQLQEFVFICFKRFHNCTDTLFDCLVNTTSIRLVDLYLN
QVSEVPAASRVHQLEFKTCKFREVPAKKLSSFKELRVLRITKSKYLTNFLQKFEDLPNLE
VLDLSENRLSFTQCCSFHLEGTPKLKHLNLSFNSAISLSGVTHVNELESLDFRYSKLKGL
GTFPVLLALTKLIYLDISHTSTHIKSQCAFCGLESLQVLKMAGNSFHDKNPGNTFMNLAQ
LRTLDISSCELEQVSLSTFSSLHELRELNISHNRLLTFDSLAYNPLKKITILDFSSNQLF
ALTEKAIESLPRSLVHLDLSFNLFSCSCYHRSFLEWVKEHRQLLQSTEQMVCNSPEHMRN
VNILSFDPSSCQLSPTAWALSVIMSFAGILLLILIYKYYFNLYYALVLLSRCKHYVDGDH
TYDAFVIHSSKDTEWVTKELVETLEGGVPPFHLCLHYRDFTPGVPITSNIIHEGFLSSRK
VIAVISHHFLESKWCSFEFEIAQSWQFVEGKAGIIMIVLEEVDQGLLRRNLGLTRYLQRN
TYLKWKDKEINRHLFWRQLRTALLHGRRTT
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggttggcagcttcaacccctgtgtggaggtgatcaccaacttaacttacagctgcatg
gaaatgaacctctctggagttccagatgaaatcccaccttctaccgagaacttggatctg
agtttcaacacattggagtcattgacctcaaattatttctcagcagtccctgcattgatg
tttctggacctcactaggtgtgacatccagacaattgaagacaatgcttttgtggatctt
cgttacctgcttaccttgattctgactggaaatcccctccagcacctgggtccatcagcc
tttagtggtttggagtccctgcaaaggctggtagctgtggaagatgacatatcctcacta
gctgacctgcccattggacacttacatactctggaggagctgaatttgggcaagaaccag
gtagattctttgaagctccccaggtatttctccaacctgtctgctctcaaactcttgaac
ctacagtccaacaggatctcatctatctccactggagatctcgatgctttgcagggaggg
aaggggcaaaacctaacattagtgctttctataaatgaaataaaacatatccagccaggc
tcctttgagggggttcagcttggtgagctgtctctgaggtcttgttttgagaactccagt
attatgaaggcatgtattcaaggctttgctggcttacaggtcaatagactagtgctcgga
gagttcaggaacattcatccagtgagtgactttagtaatgggctcctggatggactgtgt
caggtgcagctgcaggagtttgtgttcatttgcttcaagaggtttcataattgcacggac
actctctttgactgcctggtcaacaccacctctattcggctggtggatctctacctcaac
caggtgtcagaggtccctgctgcctccagagtacaccagctggagttcaaaacctgcaag
tttcgagaggtgcctgccaagaagctgtcctccttcaaagagctgagagtgcttcggatc
accaagagcaaatacctcaccaacttcctccagaagtttgaggatctgcctaatctggag
gtgctagatctgagtgagaaccggctcagcttcactcagtgctgttcctttcacctggag
gggaccccaaagttgaagcatctgaacctgagttttaactctgctatcagcttgtctgga
gtcactcatgtcaatgagctggaatccctggattttcggtattcaaagctgaaaggtctt
ggcaccttccctgtcttacttgcccttacgaaactcatctaccttgatatttcccacacc
agcactcacatcaagtcccagtgcgcattctgtggcttagagtccctgcaagtgctcaag
atggctggcaactcctttcacgacaaaaacccaggcaacaccttcatgaacctggctcag
ctgcgcaccctggacatttccagctgcgaattggagcaggtgtctttgagcacattcagt
tctctccatgagttgcgagagctaaatatcagccacaacaggctacttacctttgactcc
ctggcctacaatcccctgaagaagatcaccatcctggactttagcagcaaccagctgttt
gccttgacagaaaaagctatagagagcctgccaagaagcttggtccacctggacctctct
ttcaacctctttagttgctcctgctaccaccggagcttcctggagtgggtgaaagagcac
aggcaactgctccagagcaccgagcagatggtctgcaacagcccggagcacatgaggaat
gtgaacatattaagctttgatccttcctcatgccaactcagccccactgcgtgggccttg
tccgtgatcatgtctttcgctggcattctgctcctgatcctcatttacaaatactacttc
aacctctactatgcgctggtgctgctcagcaggtgcaagcactatgtggacggggaccac
acctatgatgcctttgtcatccactccagcaaggacactgagtgggtgaccaaggagctg
gttgagaccttggaggggggagtgcccccctttcatctttgcctccactaccgggacttc
acaccgggggtgcccatcacctccaacataatccacgaagggttcctgagcagcaggaag
gtcatcgctgtcatttcccaccacttcctggagagcaagtggtgcagctttgagtttgag
atagcccagtcctggcagtttgtggagggcaaagctggcatcatcatgattgtcctggaa
gaagtggaccaggggctgctgcgacgcaatctgggtctgacccgctacctgcagaggaac
acctacctcaagtggaaggacaaggaaataaacaggcacctcttctggaggcagctaagg
acagccttgctacatggcagacgtacaacctaa
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