Carettochelys insculpta (pitted-shelled turtle): 142024214
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Entry
142024214 CDS
T11194
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142024214 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142024214 (CNOT3)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
142024214 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
142024214 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
142024214
NCBI-ProteinID:
XP_074872089
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All DBs
Position
22:14930778..14948835
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AA seq
714 aa
AA seq
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MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTSTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHI
RMLETILRMLDNDSIQVDSIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
AKNGSKSVHNNHPPPSPAVTPSYQLGSSSSTSSSLGNGPGSGSNGAMSNSSGSGSTGAKA
LPATGHTPSTPTPYAQAVAPPPPGANASQPRPPSAQQNASKQNGATSYSSVVADSTSDSI
LSSGPALPSQPVAHNPPSSAAKEPSGAPAPPSASSGLLVPMTVNTPSSPTPSFSEAKPGQ
PLLNGPPQFSSTPEIKAPEPLSSLKSMAERAAVSSSIEDPVPSLHLAERDILISSTTSQP
ASSQPAIQLSEVNIPLSLGVCPLGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLP
RNPCPTPPYHHQMPPLHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFH
TKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagaggaaattgcaaggtgagatcgatcggtgtctcaagaaggtctcggag
ggggtggagcagtttgaggatatctggcagaagctccacaatgcagccaacgccaaccag
aaggagaagtacgaggccgacctgaagaaggagatcaagaagctgcagaggctgagggac
cagatcaagacgtgggtggcttcaaacgagatcaaggacaagaggcagttgatagacaac
cggaagctcatcgagacgcaaatggagcggttcaaggtggtggagcgggagaccaagacc
aaagcctactccaaggaggggctgggcctggcgcagaaggtcgaccctgcccagaaggag
aaggaggaggtcggccagtggctgacgagcaccatcgacacgctgaacatgcaagtggat
cagttcgagagtgaggtggagtcgctctcggtgcagacgcgcaagaagaagggggacaag
gataagcaggaccggatcgaggggctcaagcggcacatcgagaagcaccggtaccacatc
cgcatgctggagaccatcctgcgcatgttggacaacgactccatccaggtggactcgatc
cgcaagatcaaggacgacgtggagtattatgtggactcctcgcaggaccccgacttcgag
gagaacgagttcctctatgatgaccttgacctagaagacattccacaggctctggtagcc
acctccccacccagccacagccatatggaggacgagatcttcaaccagtctagcagcact
cccacctccaccacctccagctcgcccattccgcccagccctgccaactgcaccacggag
aattcggaagatgacaagaagagggggcggtcgacagacagcgaggtcagccagtctccc
gcgaagaatggttcgaaaagcgtccacaacaaccaccccccgccctcgccggccgtcacc
cccagctaccagctgggcagcagctccagcacctcgtcctcgctgggcaatggcccgggc
tccggcagcaacggggccatgtccaacagcagcgggagcgggagcaccggggccaaggcc
ctccccgccaccggccacacgcccagcacccccacgccctatgcccaggctgtggcgccc
ccaccccccggtgccaacgcttcacagccccggcctcccagtgcccagcagaatgccagc
aagcagaacggggccaccagttacagctcggtggtggctgacagcacatccgactccatt
ctcagcagcggcccagcgctccccagccagccggtggcccacaacccacccagcagtgcc
gcgaaagagcccagcggagcccccgccccccccagcgccagctctggcctcctggtcccc
atgacggtgaataccccgagctccccgaccccctccttctccgaggccaagccgggccag
ccgctgcttaatgggcccccccagttcagctccacgccagagatcaaggcgcccgagccc
ctgagcagcctgaaatccatggcagaacgagcagccgtcagctccagtatagaggaccca
gtgccatctctccacctggctgaaagggacattttaattagcagtaccacgtcccagccg
gcctccagccagccagccatccagctgtcggaagtgaacatccctctctcactgggggtc
tgccccctgggaccggtacccctcaccaaggagcagctctaccagcaggccatggaggag
gcagcttggcatcacatgcctcacccctctgactccgagaggatccggcagtacctgccc
cggaacccctgcccgacccccccttaccaccaccagatgcctccgctgcactcggacacg
gtggagttctaccagcggctctccacggagacgctcttcttcatcttctactatctggag
ggcaccaaagcgcagtacctagcggccaaagccctgaagaagcagtcgtggcggttccac
accaagtacatgatgtggtttcagcggcacgaggagcccaaaaccatcacggacgagttt
gagcagggcacatacatctacttcgactacgagaaatggggccagcggaagaaggaaggg
ttcactttcgagtaccgctatctagaagaccgtgacctgcagtga
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