Carettochelys insculpta (pitted-shelled turtle): 142024261
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Entry
142024261 CDS
T11194
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
SH3_1
PDZ_6
PDZ
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
142024261
NCBI-ProteinID:
XP_074872189
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All DBs
Position
22:complement(13782591..13816477)
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AA seq
1796 aa
AA seq
DB search
MPRSPGSSEEERVSEYPEGESDSESSGDGLPSASPGALDRRTPGAPMAVPDDARFSMMVF
RIGIPDLHQTKCLRFNPDAAIWVAKQQILCALNESLKDVLNYGLFQPATDGRDAKFLDEE
RLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGLKKFLEYVQHGAAEKV
ARLLDKGLDPNYHDSDTGETPLTLAAQLEGTVDVIRLLCLGGAHIDFRARDGATALHRAV
CTRRCTALMALLDLGGSPNYKDRRGLTPLYHTAMVGGDPRCCELLLYNQAHIGTVDENGW
QEIHQACQHGHSQHLEHLLFYGAEPGAQNASGNTALHVCALYNKESCARILLYRGANKEI
KNNSGQTPFQVAVIAGNFELGELIKNHRDSDVVPFQESPQYAARRRDGGRGLGVPHLLLR
ANSDTSMTVPDWLLYGSPAAPPPASGVVQATKISTGTLRSASSPRGARTRSPSRGRHPED
GKRQQRGRPSSSGFPKDTGAGGTLSGRGTKRKLYSAVPGRTFMAMRAYQAQAEGELSLSK
GEKIKVLSVGEGGFWEGQVKGRVGWFPSDCVEEVPTKMPDGKQDTRSDKAKRLFRHYTVG
SYDSFDAPSDYIIKEKTVLLQKKDNEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVD
EGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNNLMVKVVMVTRNPEMEEAM
RKKAAPQQTKRLPAPAISLRSKSMTSELEEMVSPWKKRSEYEPALATEKKRTVYQMALNK
LDEILAAAQQTISVGEGPSSSGLPSLGKARGPKGYFPSEANFEPHRMGQPSYERLSYLPT
AAPQGLMLRQKSIGSVEDEKPYLAPPAMKFSRSLSVPGSEEIPPPPTTSPPEPPYSTPPS
ATGRLTPAVRSTFNPAAEAKLYPASLQQEPPGLEAPARRDKLTMYRQELGHGAEAGAARG
WRGHHPSSELRYYNLPGRAASTAMYVPAKPLRRKGPLVKQTKVEDEQRQQSARPQAQPPP
TPSAPEKSSIAIPTIVIKAPSTSSSGRSSQGSSVEAEPQPEPAPGPTLPLHNSLDFTSQF
GAALVGAARRDREWHSEARRRSALFLSTEVPEEEAPEPAPAPRLRHSKSIDEGMFSAEPY
LQLSYAQPLPPGTYYPARPAKAYGSSSASTTSAFTTVCSSFLSRPASGSAPPLVHPLTGK
ILDPSSPLGLALVARERALQESQSQQLQQGRAEVEERRSRPSSPRFRDGAPEPAAGGGSV
LRPWGELQAGEAESPRRRAPAEPKGVPRAEEAGEKLELHVRFVENCRPREESEPGPRAPP
GRAVEENGLPLLVLPPPAPSIDADDEFLFTEPLPPPLEFSNSFEKPDSPKAGPEPMPPPP
PPPPAAALDSTASSLTSYDSEVATLTQGGAPEPREAPHVNFSSVVSAIQIPAPEPPEAVT
DSGIEEIDSRSSSDHHLETISSVSTLSSMSGLSSEGAELVDSYISYMDGQAFGGKLRSRP
FPARRDPATPTSSTISVAACAESVFALTPAPAQEPPAPQRRSPTLAWEEGAGTGAGAATA
SPISAMKASMISELSSKLQQMSGVSWARPAEGAGSFGADRPGSLQRQRLPEDTAAPLGPS
KPPSSLFHNWPKAGPGAKAPKSVEFDIRPALRRAPSPAALPTEHKISLAPRPSSLPILPS
VPLYGGLYDLRGSPSAGPAPFPDFPASSRSLSPTHFLSPATDKPFGAKPLPFWSKADVGD
WLDFLQLGEHRARFLEHEIDGSHLPSLTKEDFIDLGVTRVGHRMNIERALKLFLER
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgccccggagccccggctccagcgaggaggagagagtctcggagtatcctgagggggag
tcagactcagagagctccggcgacggcctccccagtgccagccccggcgccctggaccgc
aggaccccaggggcccccatggcagtgcccgacgacgcccgcttcagtatgatggtcttt
cggatcggcatcccggacctgcaccagacgaaatgcctgcgtttcaacccggacgcggcc
atctgggtggccaagcagcagatcctgtgtgccctgaacgagagcctcaaggacgtgctg
aactacggcctcttccagccggccaccgacgggcgcgacgccaagttcctggacgaggag
cggctgctgcgcgagtacccccagagcttcgagaagggcgtgccctacctggagttccgc
tacaagacccgggtttacaagcagaccaacttggatgagaagcagctggccaaactgcac
accaagaccggcctgaagaagttcctggagtacgtgcagcacggggcagcggagaaggtg
gcgcggctgctggacaaaggtctggaccccaactaccatgactcggacacaggggagacc
ccactgacgctggcagcccagctggagggcaccgtcgacgtgatccggctgctgtgcctt
gggggcgcacacattgatttccgggcccgggatggagccactgcactgcaccgggcagtg
tgcacccggcgctgcacagccctgatggcgctgctggaccttgggggctcacccaactac
aaggaccggcgaggcctcacccccctgtaccacacagccatggtcggaggcgacccccgg
tgctgtgagctgctgctctacaaccaggcgcatatcggcaccgtggacgagaacggctgg
caggagatccaccaggcctgccagcatgggcactcccagcacctggagcacctgttgttc
tatggggccgagccgggggcccagaacgcctcaggcaacacggccttgcacgtctgcgct
ctctacaacaaggagagctgcgcccgcatcctgctctaccggggggccaacaaagagatc
aagaacaacagcggccagacgcccttccaggtggccgtgatcgctgggaacttcgagctg
ggggagctgatcaagaaccatcgggactcggatgtggtcccgttccaggagtccccgcag
tacgctgcccggcggcgggacgggggccgcggcctgggggtgccccacctcctcctccgc
gccaacagtgacaccagcatgaccgtgcccgactggttgctgtacggctccccggctgcg
ccccccccagcctccggggtcgtgcaggccaccaagatcagcaccggcaccctgcgcagc
gccagcagccctcgcggtgcgcgaacccgctctccctcccgcggccgccaccctgaggat
ggcaagaggcagcagcgtggacggcccagctctagcggtttccccaaggacacaggggcg
ggcgggacgctgagcggccgggggacgaagcggaagctgtactcggcggtgccgggccgc
accttcatggccatgagggcctaccaggcgcaggcggagggcgagctctcgctcagcaag
ggcgagaagatcaaggtgctgagcgtgggcgaaggcgggttctgggaggggcaggtgaag
ggccgggtcggctggttcccctcagactgcgtggaggaggtgcccactaagatgccagat
ggaaagcaagacacccggagcgacaaggccaagcggctcttccgtcactacaccgtgggc
tcctacgacagcttcgacgcccccagtgactacatcattaaggagaagacggttttgctg
cagaagaaggacaatgaaggctttgggttcgtgctgcgtggagccaaggcgcagaccccc
atagaggagttcacacccaccccggccttccccgccctgcagtacctggagtcggtggat
gaggggggcgtggcctggcgcgcaggtctccgcatgggggacttcctgatcgaggtgaat
gggcagaacgtggtgaaggttgggcaccggcaggtggtgaacatgattcgccaggggggc
aacaacctgatggtgaaagtcgtcatggtaaccaggaaccccgagatggaagaggccatg
agaaaaaaagcggctccccagcagacgaagcgactgcctgctccagccatctcactgcgc
tccaaatccatgacttcagagctggaggagatggtctcaccctggaagaagaggagcgaa
tatgagccggcgctggccacagaaaagaagaggacggtctatcagatggcgctgaacaag
ttggacgagatcctggctgcagcccagcagacgatcagcgtgggggagggtcccagctcc
agcggactcccctccctgggcaaggcccgaggccccaagggctacttcccctccgaggcc
aattttgagccacatcgaatggggcagcccagctacgagcgcctgtcctacctgcccact
gctgccccccagggcctcatgctgcgccagaaatccatcggctcggtggaggatgagaag
ccctacctggcacctccagccatgaagttcagtcgcagcctctcggtgcccggctcggag
gagatccccccgccccccaccacctccccgcccgagcccccctacagcacccccccgtcg
gccacgggccggctcacgcccgccgtgcgctccaccttcaacccggccgccgaggccaag
ctgtacccggcctcgctccagcaggagccacccggcctggaggccccggcccggcgcgac
aagctgaccatgtaccgccaggagctgggccacggggctgaggcgggggccgcccggggc
tggcgcgggcaccacccgtcctcggagctgcgctactacaacctgccgggccgggccgcc
agcacggccatgtacgtgccagccaagccgctgcgccgcaagggccccctggtgaagcag
accaaggtggaggacgagcagcggcagcaaagtgccaggccccaggctcagccgcccccc
acgccgtccgcccctgagaagagctccatcgccatccccaccatcgtcatcaaggcgccg
tccaccagcagcagcgggcgcagcagccagggcagcagcgtggaggcagagccgcagccc
gagccagcgcctgggcccaccctgcccctccacaacagcctggacttcaccagccagttt
ggggccgcgctggtgggggcggcccggcgggaccgggagtggcacagcgaggcacgccgc
cgctccgcgctgttcctctccaccgaggtgcccgaggaggaggcgcccgagccggccccg
gccccccgcctgcgccactccaagagcatcgacgagggcatgttctcggccgagccctac
ctgcagctcagctacgcccaacccctgcccccgggcacctactacccggcgcggcccgcc
aaggcctacggcagcagcagcgccagcaccaccagcgccttcaccactgtctgctccagc
ttcctgtcccggcccgccagcggcagcgccccgcccctcgtccacccgctgaccgggaag
atcctggaccccagctcgccgctggggctggcgctggtggcccgagagcgggcgctgcag
gagtcgcagtcccagcagctgcagcaaggccgagcggaggtggaggagcggcggtcgcgg
ccgtcctcgccccgcttcagagacggggcgccggagccggccgcggggggcggctccgtc
ctgcgcccgtggggggagctgcaggcgggggaggcggagagcccccggcgccgggcgccg
gcagagcccaagggcgtcccgcgggcagaggaggcgggcgagaagctggagctgcacgtt
cgcttcgtggagaactgccggccccgggaggagagcgagccggggcccagggcgcctcca
ggccgggcagtggaggagaacgggctgccgctgctggtgctcccgccgcccgccccctcc
atcgacgccgacgacgagttcctcttcactgagccgctgccgccgccgctggagttttcc
aacagcttcgagaagcccgactcgcccaaggccggcccggagcccatgccgccgccgccg
ccgccgccacctgccgccgccctggactccaccgcctccagcctgacctcctacgacagc
gaggtggcgacgctgacccagggcggggcgcctgagcctcgcgaggccccccacgtcaac
ttctcctccgtggtctccgccatccagatcccggcgcccgagccccccgaggcggtgacc
gactcaggcatcgaggagatcgacagccgcagcagcagtgaccaccacctggagaccatc
agctccgtctccaccctgtccagcatgtcggggctgtccagcgagggggccgagttggtg
gacagctacatcagctacatggacggccaggccttcgggggcaagctgcgctcccggccc
ttccctgcccgccgcgacccggccactcccaccagctccaccatctcggtggcggcctgc
gccgagagcgtcttcgccctgacgcctgccccggcccaggagccgcccgccccgcagcgc
cgctcccccaccctggcctgggaggagggcgccggcaccggcgccggagccgccacggcc
tcgcccatctcggccatgaaggccagcatgatcagcgagctgagctccaagctgcagcag
atgagtggggtgtcctgggcccggcccgcggagggtgcgggctccttcggcgccgaccgg
cccggctccctgcagcggcaaaggctccccgaggacacggcagcccccctgggcccctcc
aagccgcccagcagcctgttccacaactggcccaaggcggggccgggcgccaaggccccg
aagagcgtggagttcgacatccgcccagcactgcgccgcgcccccagcccggccgccctg
cccaccgagcacaagatcagcctggcaccgcgcccctcctccctgcccatcctgccctcg
gtgcccctctacggcgggctctacgacctgcggggctccccctcggccggcccggcgccc
ttccccgacttccccgccagcagccgctccctctcgcccacccacttcctgtcgcccgcc
acggacaagcccttcggcgccaagcccctgcccttctggagcaaggcggacgtgggcgac
tggctggacttcctgcagctgggcgagcaccgggcccgcttcctggagcacgagatcgac
ggctcccacctgccctcgctcaccaaggaggatttcatcgacctgggcgtcacccgcgtc
gggcaccgcatgaacattgagcgtgccctcaagctcttcctggagaggtga
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