Carettochelys insculpta (pitted-shelled turtle): 142024265
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Entry
142024265 CDS
T11194
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04514
Cell adhesion molecule (CAM) interaction
ciz04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
142024265 (LRRC4B)
04517 IgSF CAM signaling
142024265 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ciz04515
]
142024265 (LRRC4B)
Cell adhesion molecules [BR:
ciz04515
]
Immunoglobulin superfamily
NGL family
142024265 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_9
LRR_1
ig
V-set
Ig_2
VEGFR1-3_N_Ig-like
LRRNT
LRR_At5g56370
LRR_EndoS
LRR_RPS2
DUF7617
Insulin_TMD
Ig_MYOM1
Motif
Other DBs
NCBI-GeneID:
142024265
NCBI-ProteinID:
XP_074872200
LinkDB
All DBs
Position
22
Genome browser
AA seq
645 aa
AA seq
DB search
MAAPRCCSRRGPPPPSLSRMLWKPVLVLMLWLPSLAWAGASPTSCPAACSCSNQASRVIC
TRRELVEVPESISINTRYLNLQENNIQVIKTDTFKHLRHLEILQLSKNLIRKIEVGAFNG
LPNLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGEL
KKLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDMIRPGSFQGL
TSLRKLWLMHAQVSTIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP
WHCNCDVLWLSWWLKETVPNNTTCCARCHAPASLKGRYIGELDQSHFTCYAPVIVEPPTD
LNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTG
QYTCMVTNSAGNTTASATLNVSAVDPAATGYTYFTTVTVETMETAQEDALPTKKEPGPTP
AVGWDVTYSTTSLTPRSTRSTEKPFTVPITDAAEGGMKDLDDVMKTTKIIIGCFVAITFM
AAVMLIVFYKLRKQHQLHKHHGPTRTIEIINVEDELPAAAGAPGDSHLALPALEHDHLNH
YAAFKAHYNNNAGPLNCAKNPLLNSIHEPLLFKSSSKENVQETQI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggctgccccccgctgttgctcccggagggggccaccgcctcccagtctctctaggatg
ctttggaagccagtgctggttctcatgctgtggctgccctcgctggcgtgggctggggct
tctcccacgtcctgcccggcggcctgctcctgcagcaaccaggccagccgggtgatctgc
acgcgccgggagctggtggaggtgccggagagcatctccatcaacacgcggtacctcaac
ctgcaggagaacaacatccaggtcatcaagacggacaccttcaagcacctgcggcacctg
gagatccttcagctcagcaagaacctgatccgtaagatcgaggtgggggccttcaacggg
ctgcccaacctcaacacgctggagctctttgacaaccgcctgaccacggtgcccacccag
gccttcgagtacctctccaagctgcgggagctgtggctacggaacaaccccatcgagagc
atcccctcctacgccttcaaccgggtgccctcgctgcgccgcctggacctgggcgagctg
aagaagctggagtacatctctgaggcggcctttgaggggctggtcaacctgcgctacctg
aacctgggcatgtgcaacctcaaggacatccccaacctgacggcgctggtgcggctggag
gagctcgagctgtcgggcaaccggctggacatgatccgccccggctccttccagggcctg
acaagcctgcgcaagctatggctgatgcatgcccaggtgtccaccatcgagcgcaatgcc
ttcgacgacctcaagtcgctggaggagctgaacctgtcccacaacaacctcatgtcgctg
ccccatgacctctttacccccttgcaccggctggagcgggtgcacctcaaccacaacccc
tggcactgcaactgtgacgtcctctggctcagctggtggctgaaggagactgtgcccaac
aacaccacctgctgcgcccgctgccacgccccggccagcctcaaggggcgctacatcggc
gagctggatcagagccacttcacctgctacgcccccgtcattgtcgagccgcccaccgac
ctcaatgtgacggaggggatggcggcggagctgaagtgccggacgggcacctccatgacc
tcggtcaactggctgacgcccaacgggacgctgatgacccacggctcgtaccgggtgcgg
atttccgtgctgcacgacggcacgctcaacttcaccaacgtgacggtgcaggacacaggg
cagtacacctgcatggtgaccaactcggccggcaacaccacggcctcggccacccttaac
gtctcggccgtggaccccgccgccactggctacacctacttcaccaccgtcaccgtggag
accatggagacggcccaggaggacgccctgcccaccaagaaggagccgggccccacgccc
gccgtgggctgggacgtgacctactccaccacctcgctgacgccccgctccactcgctcc
acggaaaagcctttcaccgtgcccatcaccgacgcagctgagggcggcatgaaggacctg
gacgacgtgatgaagaccaccaagatcatcattggctgcttcgtggccatcaccttcatg
gcggccgtgatgctgattgtcttctacaagctgcgcaagcaacaccagctgcacaagcat
cacggccccacgcgtactatcgagatcatcaacgtggaggacgagttgccggccgcagcc
ggtgcccccggcgacagccacctggccctgccggccctggagcatgaccatctcaaccac
tacgcggccttcaaggcccactacaacaacaacgcggggcccctgaactgcgccaagaac
ccgctgctgaactccatccatgaacctctcttgttcaagagcagctcaaaggagaacgtg
caagagacgcagatctga
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