Carettochelys insculpta (pitted-shelled turtle): 142024360
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Entry
142024360 CDS
T11194
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142024360 (NPAS1)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
142024360 (NPAS1)
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
142024360
NCBI-ProteinID:
XP_074872400
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All DBs
Position
22:19218896..19316942
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AA seq
877 aa
AA seq
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MMAAPFGSEVKCVSVEWDFLQGLLVKNQPVPCLQALRKEKSRNAARSRRGKENFEFYELA
KMLPLPGAITSQLDKASIVRLTISYLKMRDFASHGEPPWGLRAEGSPPPGPAGKGPSRRN
VAALLTKLFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDY
VHPGDHPEVAEQLGLKTPLDAGGPLQGSQKLPVLTGASSSSSSQIEATEPDPASSHAPSE
HDALERSFFVRMKSTLTKRGLHVKTSGYKVIHVTGRLRPRLPSFSHAHSVLSRVLGLVAL
AHTLPPSTLSEVRIECHMFVFRVNMDLQIVYCESRISDYMDLCPSELVGKSCYQFIHGED
VEGIRQSHLDVLKKGQVVTRYYRWLQKHGGFVWIQSCATISVNVKNPSERNMVWVNYILS
KPEGKNMALDIFQLPGIPAHQTDASDISDLEPDFKESDQGPECKQGNQFLPKAAGTLAKG
YSRSVPDEGARCSMAEHDASSPDTSYKDDDTSEEARTSDAEKHKGPRNKRIKLEFPPESP
PPEASFISTEESDSGSEDEPEPPPPPQPLALERRVNGYSMAAGRNMGPSQPCTSKFASVI
QTQRSYPTKASPALSIKTEQSQPPKYDKAALWTYPSAHDALHEGLHYTVSKALSLEKPLL
RPATSHLYVSIPDSVLTPPEMDSSGGLAKAPFNTSPRAVLPAPASETLSPPLSGSPCEER
AASTPFAPLVYPGEMEALQRFHAGNMVLPLVHQLGGPHGITNTTGSQSLYTTSTIRYAPA
DMTLAVPGGVLPASHAINLMDIGNAESKSPMELMYHHIQRLNMVAPFGNSASATGLAQLS
GTTGGVFTAAESLFSTLPFSVAGGSIHSLSASERKED
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagcgccgttcggcagcgaggtgaagtgcgttagcgtagagtgggacttcttg
caaggcctgttggttaagaatcagccggtgccctgcctgcaggccctgcggaaggagaag
tcccgcaatgcggcccgctcccggcgcggcaaggagaacttcgagttctacgagctggcc
aagatgctgcccctgcccggcgccatcaccagccagctggacaaagcctccatcgtccgc
ctcaccatcagttacctcaagatgcgcgacttcgccagccacggcgagcccccctggggg
ctgagggccgaagggagcccaccgcctggccctgctgggaaaggtcccagcaggaggaac
gtggcagctctgctaaccaagctctttgaacagcacctgggaggacacattttgcagtcc
ctggacgggtttgtgtttgcgctaaaccaggaggggaagtttctttacatctccgagacg
gtgtctatttacctcgggctctcgcaggtggagctgacgggcagcagtgtctttgactac
gtccaccctggagaccaccccgaggtggctgagcagctggggctcaagacgcctctggat
gctggcggccccctgcaggggagccagaaactcccagtcctcaccggtgccagctcctcc
tcctcctcccagatcgaggccactgagcccgatcctgccagctcccacgccccctctgag
cacgatgccctggaacgctccttctttgtccggatgaaatccaccctgaccaagcgaggg
ctgcacgtgaagacgtccggctacaaggtgattcacgttacaggacgccttcgcccccgc
ctgccgtccttctcccatgcccactccgtcctcagccgcgtcctggggctggtggccctg
gcccacacgctgccgccgtccacgctcagcgaggtgcgcatcgagtgccacatgtttgtg
ttccgggtcaacatggacctgcagatcgtgtactgcgagagcaggatcagcgattacatg
gacctgtgcccctcggagctggttgggaaaagctgctaccagtttatccatggcgaggac
gtggaggggatccggcagagccacctcgacgtgttgaaaaaagggcaggtcgtgacccgg
tattaccgctggctgcagaaacatgggggctttgtgtggattcagtcctgtgccaccatc
tcggtcaacgtcaagaaccccagcgagcggaatatggtctgggtcaattacatcctcagc
aaacccgaggggaagaacatggccctggacatcttccagctgcctgggattccagcccac
cagaccgatgcttccgacatatccgacctggaacctgacttcaaagagagcgaccagggc
ccagaatgcaagcaggggaaccagttcctgcccaaggcagctgggacgttggccaaaggc
tactcgcggagtgtgccagatgaaggggcccgttgttccatggcagagcacgatgccagc
agcccggacacgagctacaaggatgacgacacgtcagaggaagccaggacaagcgatgct
gagaaacacaaggggccccggaacaaacggatcaagttggagttcccgccggagagcccc
ccgccggaggcctcgttcatcagcacagaggaatcggacagcggcagcgaggacgagcct
gagcccccgcccccgccccagccgctggcactggagaggagagtgaacgggtacagcatg
gcggcagggaggaacatggggccaagccagccctgcacgtccaagtttgcctccgtcatc
cagacccagaggagctacccaacgaaagccagcccggcccttagcattaagacggagcag
agccagcctcccaagtacgacaaggctgccttgtggacctacccctccgcccatgatgcc
ctccacgagggactccactacactgtgagcaaagcacttagcctggagaagccccttctg
aggccagccacctcccacttgtacgtctccatcccggactccgtgctcacccctccggag
atggacagcagcgggggcctggccaaggccccctttaacacctcccctcgggcggtgctc
ccggcccctgcgtctgaaacgctctctcccccgctctcggggtcgccatgcgaggagagg
gctgcgtccacgccctttgccccgctggtctatccgggcgagatggaggccctgcagcgg
ttccacgcagggaacatggtgctcccgctggtgcatcagctcggtgggccccacgggatc
accaacaccacaggctcccagagcctctacaccaccagcacgatccggtacgccccggcc
gacatgaccctcgctgtgccgggtggcgtgctgccggcctcccatgccatcaacctcatg
gacattggcaacgctgagtcaaagagccccatggaactcatgtaccaccacatccagcgg
ctcaacatggtggcgcccttcgggaactctgccagcgccactggtttggcgcagctttcg
ggcaccacagggggtgtgttcacagctgccgagtccttgttctccacgctgcccttctct
gtggccggcggcagcatccacagcctgtcagcctcagagcgcaaagaggactga
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