KEGG   Carettochelys insculpta (pitted-shelled turtle): 142024374
Entry
142024374         CDS       T11194                                 
Symbol
PNKP
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
ciz  Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ciz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    142024374 (PNKP)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ciz01009]
    142024374 (PNKP)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ciz03400]
    142024374 (PNKP)
Enzymes [BR:ciz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     142024374 (PNKP)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     142024374 (PNKP)
Protein phosphatases and associated proteins [BR:ciz01009]
 HAD phosphatases
  Other HAD phosphatases
   142024374 (PNKP)
DNA repair and recombination proteins [BR:ciz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     142024374 (PNKP)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Hydrolase HAD Hydrolase_6
Other DBs
NCBI-GeneID: 142024374
NCBI-ProteinID: XP_074872432
LinkDB
Position
22:complement(14100354..14105227)
AA seq 562 aa
MQCWLERRDAQLEPVALPDGVPVVLGRGPLTRVADRKCSRKQVELLADYKHRAVRVTQRG
VNPTTVEELQLGPGDSSTLQEGQTLWLVNGCYPYTLRFLPAPRRSLQDVSSPKRCHPAGG
EEAPAPKRLKAPSSSAEEEEEEEEEDLAVVAKLHQLQETAASAEQAKAGVPHPPHGDPSA
LLPHPRDSWEEHGKLLLFTKEGVVPSAKVAGFDLDGTIITTKSGKVFREQRARARILCSE
VPRKLKQLQMEGYKLVIFTNQMGISKGRLRPEVFKAKVEAVLERLGVPMQVFVATGSGIY
RKPLLGMWEHLCEKANGAVAVTLQSCIYVGDAAGRPPAWAPGHKKKDFSCSDRLFALNAG
LPFHTPEEFFLDWAPAPYQLPPFDPRELDSQGRLYDPPDAPLVSPTPELVVAVGFPAAGK
STFLKQHLVPAGYVYANRDTLGSWQKCVELCVAALRQGKSAAVDNTNPDPESRRRYIECA
QDAGVPCRCFRFTTTLEQAKHNNRFRELTGTGHVADIVLTSYRTKFVEPALSEGFTQILR
VHFVPRFADAGQAALYRLFSEG
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgcagtgctggctggagcgccgggacgcgcagctcgagccggtggcgctgcccgacggg
gtcccggtggtgctgggccgggggcccctcacgcgcgtggccgacaggaagtgctcccgg
aagcaagtggagctgctggcggactacaagcaccgggctgtgagagtcacgcagcggggc
gtgaaccccaccacggtggaggagctgcagctggggccgggcgacagcagcacactgcag
gaggggcagacgctgtggctggtgaacggatgctatccctacaccctgcgcttcctgccc
gccccccgccgcagcctgcaggatgtctccagccccaagcgctgccacccggccggcggc
gaggaagcacctgcccccaagaggctgaaggcccccagctcctccgcagaggaggaggag
gaggaggaggaggaggacctggcggttgtcgcaaaactgcaccagctacaggagacggca
gccagcgctgagcaggcaaaggctggggtgccccacccgccccatggggacccctcggcg
ctgctgcctcaccccagggactcctgggaggagcatggcaagctgctgctcttcaccaag
gagggggtggtgcccagcgccaaggtcgctggatttgacctggatggaaccatcatcacg
actaagtcagggaaggtttttcgtgagcaaagagcccgggccaggattttgtgctctgaa
gttccccggaagctgaagcagctgcagatggaggggtataagcttgtgatcttcaccaac
cagatggggatcagcaaggggcgcctgcgccccgaggtcttcaaggcgaaggtggaggct
gtgttggagcgcctgggggttcccatgcaggtgttcgtggcgactggttctgggatttac
cgcaaacccctgctgggcatgtgggagcatctctgcgagaaggcgaacggcgccgtggca
gtgaccctgcagagctgcatctacgtgggagatgcggctgggcggccccccgcctgggcc
cctgggcacaagaaaaaggatttctcctgcagtgaccggctgtttgccctgaatgcagga
ctgccattccacaccccagaggagtttttcctggactgggcacctgccccctaccagctg
ccgccctttgacccgcgggagctggattcccagggacgtctctatgatccccccgacgct
cccctggtgtcccccacgcctgagctggtggtggctgtgggcttccctgctgctggcaag
tcgaccttcctgaagcagcacctggtgccagctggctacgtctacgccaaccgggacacg
ctggggtcgtggcagaagtgtgtggagctctgcgtggcagctctgcgccaggggaagagc
gcagccgtggacaacaccaaccctgaccctgagtcacgccgcaggtacatcgagtgtgcc
caggacgccggggtcccctgccgctgcttccgcttcaccaccaccctggagcaggccaag
cacaacaaccggttccgggagctgacaggcactggccatgtcgctgacatcgtcctgacc
agctaccggaccaagttcgtggagccggcactgagcgagggcttcacccagatcctgcgg
gttcacttcgtgccgcggttcgccgacgctggccaggctgcactctaccgcctgttctca
gagggctga

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