Carettochelys insculpta (pitted-shelled turtle): 142024387
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Entry
142024387 CDS
T11194
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04510
Focal adhesion
ciz04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142024387 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142024387 (LAMB1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
142024387
NCBI-ProteinID:
XP_074872453
LinkDB
All DBs
Position
1:351788101..351875424
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AA seq
1786 aa
AA seq
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MRGLQVYAGALLGLWAAALAQEPEYSYGCAEGSCYPATGDLLIGRASNLSASSTCGLRKP
EPYCIVSHLQEDKKCFTCDSRYPFHDPLNPDSHLIENVVTTFAPNRLKLWWQSENGLENV
TLQLNLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWQVYRYFAYDCENSFPGVSAGP
MKKVDDIICDSRYSDIEPSTEGEVIYRALDPAFRIEDPYSPRIQNLLKITNLRINFTKLH
TLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECSPVNGFNEEVEGMVHGHCMCR
HNTKGLNCEQCMDFYHDVPWRPAEGRHSNACKKCNCNGHSVQCHFDMAVYMATGNTSGGV
CDNCQHNTMGHNCEQCKPFYFQHPERDIRDPNICEPCNCDPLGSQNGGICDRYTDFSTGL
IAGQCRCKLFVEGEHCGLCKEGFYGLSADNPLGCQSCACNPLGTLPGGNPCDSSTGSCYC
KRLATGRHCEQCLPEHWGLSNDMDGCRPCDCDKGGALNNNCSSETGQCQCRPHIIGRPCN
EMEPGYYFMSLDHYIYEAEEANFGPEASIVERLFSPDRIPSWTGIGFVRVPEGAYLEFYI
DNIPYSMEYEIVIRYEPQLPDHWEKAVVTVSRPGRIPTSSRCGNTVPDDDNQIVSLSPVS
RYVVLPRPVCFEKGLNYTVRLELPQYSSLDTDVESPYTLIDSLVLMPYCKSLDIFTVGGS
GEDVITNSAWETFQRYRCLENSRSVVKTPMTDVCKDIIFSISAQLHETTLACQCNPQGSF
SSMCDPNGGQCQCRSHVIGRRCDRCAPGTFGFGPNGCNACECHMRGSVGSFCHPETGQCH
CFHGVYGRQCDRCLPGYWGFPSCQPCQCNGHTDDCDPYTGECLNCRDSTTGHNCERCLAG
YYGDPVLGSGDHCRPCPCPDGPESGRQFANSCYQDPISLQVVCVCNVGYTGSRCDECASG
FFGDPEETGGVCQPCQCNNNIDMTDPGACDKQSGKCLKCLYQTEGENCHLCKYGYYGHAL
QQDCRKCVCNYLGTVRERCNSSEVCQCDKTTGQCDCLPHVTGQNCDHCAPNTWRLASGTG
CEPCECDVAHSFGPSCNEFTGQCRCMPGFGGRTCRECQEFFWGDPNVACQACECDSRGIQ
TPQCNRSTGLCVCKEGVEGPRCDKCTRGYSGIFPDCSPCHQCFALWDVIIGELTNRTQRF
LERAKILKISGVSGPYQQTINAVEEKLNEIKSILAQNPAAEPLKNIGNLFEEAGKLTAGI
TEKMAEIEDKLSVIALKSNNTDTHLRALETDAESLDRVVKELAEQLEFIKISDIRGALDS
ITKYFQMSLEAEERVNATTVHPDSLVELSAQTRQEVEDLISEREAQFKVKQEEQSRLLDE
LAGKLQSLDLSDVAEKTCGTPSGASCADSECGGLSCRTEEGEKKCGGPGCEGLVTVAHNA
WQKAMDFDRDVLNALAEVEELSKMVSEAQQRADEAKQNAQEVLLKTNATKEQVDRSNEEL
RNLIKQIREFLMQDSADLDSIEAVANEVLNMEMPSSPQQLQTLTEDIRERVESLSDVEVI
LQQSAGDIARAEMLLNEANKASKSATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDI
RGTQDLLTSIESENAASEETLNNATLRLTELEKSVEDLRQKAATNSENIGETEKTIASAK
QMAEKVKEELDGELGAKYKTVENLIAKKTEESADARKKAGMLQNEAKSLLAQANSKLQLL
KDLESTYENNQKVLEDKAKQLVELEETVRSLLQAISQKVAVYSTCL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcctccaggtgtacgcgggcgccctgctagggctgtgggccgccgccctggct
caggagcccgaatacagctacgggtgcgccgagggcagctgctacccagccaccggggac
ctgctcatcggccgcgcctcgaacctctccgccagctccacgtgcgggctgcggaagccg
gagccctactgcatcgtcagccatctccaggaggacaaaaaatgtttcacatgcgattct
cggtacccctttcatgatcctctcaacccggatagccatcttattgaaaatgtggtcaca
acatttgctccaaaccgcctcaagctgtggtggcagtcggaaaatggtttggaaaatgta
actctccaactaaatctggaagctgaattccatttcactcatctcattatgaccttcaag
accttccgcccagcagcaatgctaatagaaagatcatcagattttggaaaaacctggcaa
gtatatcgatactttgcatatgactgtgagaattccttccctggtgtttcagctgggcct
atgaagaaagtcgacgacattatttgtgattcccggtattctgacattgaaccttcaact
gagggagaggtcatatatcgtgccttagatccagcttttagaattgaagatccatatagc
ccaagaattcaaaacctattaaaaatcacaaatttaagaatcaacttcaccaagttacat
acgttgggagacaatctgttggattcaagaatggaaatcaaagaaaagtactattatgcc
atttatgatatggtggttcgtgggaactgtttctgttatggccatgccagtgagtgttca
ccagtgaatggttttaatgaagaggtggaaggaatggtccatggacactgcatgtgcaga
cataataccaaaggtttaaactgtgaacagtgtatggatttctaccatgatgtaccatgg
agaccagctgaaggacgccatagtaatgcgtgcaaaaagtgcaattgcaatgggcactct
gtgcagtgccattttgatatggctgtgtacatggcaactggaaatacaagcggtggagtg
tgtgataattgccagcataacacaatgggacacaactgtgaacagtgcaagccattttac
tttcagcatccagagagagatatacgggatcctaacatctgtgagccgtgtaactgtgat
ccacttggctcccaaaatgggggaatatgcgatcgatatactgacttctcgactggcctt
attgctggacagtgccgttgcaaattgtttgtggaaggggaacattgcggcctctgcaaa
gaagggttctatggactaagtgcagataacccccttggttgtcaatcttgtgcctgtaat
cctttgggaactcttcctggggggaatccttgtgattcatcaacaggaagctgctattgt
aaacggctagcaacaggaaggcactgtgagcagtgtctgcctgaacactggggcctgagc
aacgacatggatggatgtcggccctgtgactgtgacaaagggggagcactgaacaataac
tgctcaagtgaaactggccagtgtcagtgccggccccatataattggacgcccgtgcaat
gaaatggagcctggatattacttcatgtctctagaccattacatctatgaggcggaggaa
gccaactttggtcctgaagcgagcatagtagagcgcctgttttctccagatcgtatccca
tcctggactggaataggatttgtaagagtccctgaaggggcatatctggaattctatatt
gacaatattccatactctatggaatatgaaattgtgattcgctatgagccacagttacca
gatcattgggaaaaagctgttgttactgtttcacgcccaggcaggattcctacaagtagc
cgatgtggtaataccgttcctgatgatgataatcaaattgtgtcattatcaccagtctca
aggtatgtagttcttcctcgcccagtgtgttttgaaaagggactgaattacactgttcgc
ctggagctcccacagtactcctcccttgacactgatgtggaaagcccatacacactcatt
gactctcttgttcttatgccttactgcaaatcactggacatattcacggtggggggctca
ggtgaagatgtgatcactaacagtgcttgggaaacatttcaaagatatcgatgtctggaa
aacagcaggagtgttgtgaaaacccctatgactgatgtctgcaaggacattatttttagc
atatctgcacagttacatgagacaacattagcttgtcagtgtaaccctcaaggttcattt
agttccatgtgtgaccctaatggaggacagtgccagtgtcggtctcatgtcattggaaga
agatgtgacagatgtgcccctggcacctttgggtttggacctaatggatgcaacgcttgt
gagtgtcacatgcgaggttctgtcggttccttctgtcatcctgagactggccagtgtcac
tgtttccatggggtgtatggccgtcagtgcgataggtgcttacctggatactggggattt
ccaagctgccagccttgccagtgtaatggccacacagatgactgtgacccatacactggg
gaatgtttgaactgccgtgactccaccacaggacacaactgtgaaaggtgccttgctggc
tattatggagaccctgtcttgggatcaggagatcactgccggccttgtccttgtccagat
ggcccagagagtgggcgtcagtttgccaacagctgttatcaagatcctattagtctgcag
gttgtctgtgtctgtaatgtgggatacacaggaagcagatgtgatgaatgtgcttctggc
ttctttggagaccctgaagagacaggtggagtgtgccagccctgccagtgtaacaacaac
attgacatgactgacccaggggcctgcgacaagcagtctggaaagtgcctgaagtgcttg
tatcagacagagggtgaaaactgccacctgtgtaaatatggatactatggacatgcactg
caacaggattgtagaaagtgtgtctgtaattacttgggaacagtgcgagagcgctgcaat
agctcagaagtctgtcagtgcgacaaaacaactggtcagtgcgactgccttccccatgtg
accgggcagaactgtgatcactgtgcaccaaacacttggagactggccagtggaactgga
tgtgaaccgtgcgagtgtgatgttgctcattccttcgggccatcctgtaatgagttcact
gggcagtgtcggtgcatgcctgggtttggaggccgcacctgcagggagtgccaagagttt
ttctggggtgaccccaatgtggcctgccaagcttgtgagtgcgattcccgtggaatccag
acaccgcagtgcaatcgctccacagggctgtgtgtctgtaaggagggtgttgagggaccc
cgctgcgacaagtgcacccgcggttactccggcatcttccctgactgctcaccatgtcac
cagtgttttgctctgtgggacgtcatcatcggtgaactgaccaataggacacagaggttc
ctggagagagcaaaaattctcaagatcagtggggtcagtggcccttaccagcaaactatc
aatgctgtggaagagaaactgaatgaaattaaaagtatcctggctcaaaatccagctgct
gagccccttaaaaacattggaaacctctttgaggaagcagggaagctaaccgcaggcatt
acagaaaagatggctgaaatagaagacaagctttcagtgatagcgttaaaaagcaataac
acggacacgcacctgagggccctggagaccgatgcagagagcttagaccgcgttgtgaaa
gaacttgcagaacaacttgagtttataaaaatctctgatatccggggagccttggacagt
atcaccaagtatttccagatgtccctggaggcagaagagagggtcaatgccactactgtt
catcctgatagccttgtggagctgtcagcccagacacggcaggaagtggaagacttaatc
agtgagcgagaggcccagttcaaggtgaaacaagaggagcagtcgcgccttctggatgaa
ctggctgggaaactgcagagtctggatctttctgatgtggctgagaagacatgtggaact
ccctccggggcttcctgtgctgactcagagtgtggtggtctgagctgccgaacagaggaa
ggagaaaagaaatgcggaggaccaggctgtgaggggctggttactgtggctcacaatgcc
tggcagaaagccatggattttgacagagacgtactcaatgcattggcagaagttgaagag
ctctctaaaatggtttctgaggcgcaacagagagcagatgaagcaaaacaaaatgcccag
gaagttttgctcaaaaccaatgctacaaaagagcaagtagacagaagcaatgaagagctg
agaaaccttattaagcagatcagggaatttctgatgcaggatagtgccgatttggatagc
attgaggcagttgcaaatgaagtgttgaacatggagatgccaagtagcccccagcaacta
cagaccctgacagaagatatccgtgagcgcgtggaaagcctttctgatgtagaggttatc
ttacagcaaagtgctggagacattgccagagctgagatgctactaaatgaagcaaataaa
gcaagcaaaagtgcaacagatgttaaagtcactgcggatatggtgaaagcagcactggag
gaagctgaaaaggcccagaatgcagccgaaaaggccatcaaacaagctgatgaagacatc
agaggaacacaagacctacttacctcaattgaatctgaaaatgcagcatctgaagaaacc
ttaaacaatgccaccctacgtctcactgagctagagaagagcgtggaagaccttaggcaa
aaggctgctacaaattcggagaacattggagagactgaaaaaaccattgcttctgcgaaa
caaatggctgagaaagttaaagaggaacttgatggtgaactcggtgccaaatataaaaca
gttgaaaacctaattgccaagaaaacagaagagtctgctgatgccaggaagaaagctgga
atgctgcaaaatgaagctaaatccttgttagctcaagccaacagcaaactccagctgctc
aaggatttggaaagcacatacgagaacaatcagaaagtcttggaggacaaagccaaacag
ttggtggagttagaagagacagtgcgttccctcttacaggcaatcagccagaaagttgca
gtatatagcacctgcttgtaa
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