Carettochelys insculpta (pitted-shelled turtle): 142024513
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Entry
142024513 CDS
T11194
Symbol
HIF3A
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X1
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142024513 (HIF3A)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
142024513 (HIF3A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
142024513
NCBI-ProteinID:
XP_074872678
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All DBs
Position
22:18505101..18527760
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AA seq
899 aa
AA seq
DB search
MLGIEGTPDPQGSPGLPWHSHSCIYISPGTAPSSPCWVPQPGTEPAPTPAPSPPAAQVTL
SLLGSSPESGGRPAACGCFGGAGGSTPRACVYITCSGLVPSCDVGGGGAAPSGAVRSSQV
PLIGAALIRGWWRGLAAGTGIRGRRSDSLGCWHGSRGDAAPAGSRSTTEIRKEKSRDAAR
CRRSKETEVFYQLAHTLPFARGVSAHLDKASIMRLTISYLRMHKLVTSEEWQGQPEQVDA
CYLKALDGFVMVLTEEGDMAYLSENVSKHLGLTQLELIGHSIFDFIHPCDQEELQDVLSP
RQGFSKKKEVKTERSFSLRMKSTLTSRGRTVNLKSATWKVLHCAGHMRSYTPAREGPEEA
KGGYAEPPLRCLVLICEAIPHPANIETPLDSSTFLSQHSMDMKFTYCDERIAEVAGYTPE
ELLGCSVYEYIHALDSDSVSKSIHTLLSKGQAVTGQYRFLAKSGGYLWAQTQATVISNSK
NSQPESIVCVHFVLSQVEEVGVVLSLEQTERQGEGRRLPLKPDPAYHANGSPEEPEPDTG
ETILNISFERHGPRLLAFLHPAHVSEAELQRDPRRFCSPDLQRLLGPIFDPPGARAEGEG
APRARTSPQPPEPSLPPKEAAKSSSLAELPFDMQDVQKLFASTQEAVETALQDYEGLDLE
MLAPYISMDDDFQLSSTEQPPWLAEKRGDLAAARGKGPPPPSASPPPRPRSSSFHGVSAR
EPDVPSLPRWGSENSLSHSRSLQPPAEEPMELEGLGSSPVAPTGGNHRDYPASHLGSRKR
ALELSLVEEGADFLEAAPLKRAHSSESDSFLLPSLNLGFLLSVEEGLEAGAPRGSMVIGR
KLLALEEPMALLGDMLPFVVDGPALSQLALYDGEDEALEQSGGHFQPGEELLGELDQAT
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgcttggcatagagggcactcctgacccgcagggctcccctgggctgccgtggcactcc
cacagctgtatatatatctcccccggcacagctccctcctccccttgctgggtgccccag
cctggcactgagcctgccccaacccctgccccctcccccccagcagcccaagtgactctt
tctctcctgggttcctccccagagtcaggcggccgtccggctgcctgcgggtgcttcgga
ggggccggggggagcacgccacgtgcgtgtgtgtacatcacatgctccggtctggtgcca
agctgtgacgtgggggggggaggggctgcgccctctggtgccgtacggagcagccaagtc
ccgctgatcggggcggcgctgatccggggctggtggcgggggctagcggcaggcactggc
attcggggccggcggagcgactcgctgggatgttggcacggcagccggggagacgcggca
ccggcgggcagcaggtctacgacagagatccggaaggagaagtcgcgagatgcggcgcga
tgccggcgcagcaaggagacggaggtgttctaccagctggcccacaccctgcccttcgcc
cgcggcgtcagcgcgcacctggacaaggcctccatcatgcgcctcaccatcagctacctg
cggatgcacaagctggtcacctcggaggagtggcaggggcagccggagcaggtggacgcc
tgttacctgaaggccctggacggctttgtcatggtgctgacggaggagggtgacatggcc
tacctgtcggagaacgtcagcaagcacctggggctgacccagctggagctgatcggacac
agcatcttcgacttcatccacccctgtgaccaggaagagctgcaggatgtgctgagcccc
cggcagggcttctccaagaagaaagaggtgaagacagagcgcagcttctccctgcgcatg
aagagcaccttgaccagcagggggcgcaccgtcaacctcaagtcagccacctggaaggtg
ctgcactgtgctggccacatgcggtcctacaccccagcccgggaggggccggaggaggcc
aagggggggtacgcggagccccccctgcgctgcctggtgctgatctgtgaggccatcccc
caccccgccaacatcgagaccccactggacagcagcaccttcctcagccagcacagcatg
gacatgaaattcacctactgcgacgagaggattgcggaggtggcagggtacacgcctgaa
gagctgctgggctgctcagtctatgagtacatccatgccctggactcggactccgtcagc
aagagcatccacaccctgctgagcaaaggccaggcagtgacaggccagtaccgcttcctg
gccaagagcgggggctacctgtgggcccagacccaggccaccgtcatttccaacagcaag
aactcccagcctgagagcatcgtctgcgtccacttcgtgctcagccaggtggaggaggtg
ggcgttgtgctgtcgctggagcagactgaacgccagggtgaggggcgacgcctgcccctg
aagcccgaccctgcctaccacgccaacgggagccctgaggaaccagaaccagacacggga
gagaccatcctcaacatcagcttcgagcgccacggcccccggctcctggccttcctgcac
ccagcccacgtgagcgaggcggagctgcagcgcgacccacgccggttctgcagccccgac
ctgcagcggctgctggggcccatcttcgacccccctggagcccgagccgagggggagggg
gccccgcgggcacgcacctccccccagccccccgagcccagcctgccgcccaaggaagct
gccaagagcagctccctggccgagctgcccttcgacatgcaggacgtgcagaagctcttc
gcctccacccaggaggccgtggagacagcgctgcaggattacgaagggctcgacctggag
atgctggctccctacatctcgatggacgacgatttccagctcagcagcactgagcagccc
ccctggctggccgaaaagcggggcgatcttgctgcagccaggggaaagggtcccccgccg
ccctctgcctcacccccaccacgaccccgctccagcagcttccatggggtgtctgcccgc
gaacctgacgtgcccagcctgccccgttggggcagtgagaacagcctgagccacagccgg
tcacttcagcccccagcggaggagcccatggagctggaggggcttgggtcttccccagtg
gcacccacaggaggcaaccacagggattaccctgcctcacacctggggtccaggaagagg
gccctggagctgagcctggtggaggaaggggctgacttcctggaggcggcacccttgaag
cgtgcccatagctcggagtccgacagctttctgctgccctccctcaatctgggttttctg
ctgagcgtggaggaggggctggaagccggggcgccccggggcagcatggtgataggtcgg
aagctgctggccctggaggagcccatggccctgctgggtgacatgctgcccttcgtggtg
gacggcccagcgctctcccagctggccctgtacgatggcgaggacgaggccttggagcag
agcggcgggcacttccagccgggcgaggagctcttgggggagctggaccaggccacctga
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