Carettochelys insculpta (pitted-shelled turtle): 142025587
Help
Entry
142025587 CDS
T11194
Symbol
YBX1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142025587 (YBX1)
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142025587 (YBX1)
03041 Spliceosome [BR:
ciz03041
]
142025587 (YBX1)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
142025587 (YBX1)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
142025587 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
142025587 (YBX1)
Spliceosome [BR:
ciz03041
]
Common components
Common spliceosomal components
General mRNP proteins
142025587 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Rho_RNA_bind
Motif
Other DBs
NCBI-GeneID:
142025587
NCBI-ProteinID:
XP_074874172
LinkDB
All DBs
Position
23:2363400..2381715
Genome browser
AA seq
325 aa
AA seq
DB search
MSSEAETQPPAAPLPAAAPTAPAESKPNGGTGNGGSGLTSAAPPAGGDKKVIATKVLGTV
KWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAA
NVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSDSMPDGQGQ
QRRPYRRRRYPPYYMRRPYGRRPQYSNPPVQGEIVEGADNQGAGEQGRPVRQNMYRGYRP
RFRSLIFRGPPRQRQPREEGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQD
GKETKAAEPPAENTSAPEAEQGGAE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccagccgcccgccgcccctctccccgcggcggcccccacc
gcccccgccgagtccaaacccaacggcggcacaggcaacggtggcagcggcctgacctcg
gcggcgccccccgccggcggggacaagaaggtcatcgcaacgaaggttttgggaacagta
aaatggttcaacgtaaggaacggctacggtttcatcaacaggaatgacaccaaggaagat
gtgttcgtacaccagaccgccataaagaagaataaccccaggaagtaccttcgcagtgta
ggtgatggagagactgtggagtttgatgtggtagaaggtgaaaagggtgcagaggcagct
aatgttacaggtcctggtggcgttccagtacaaggcagtaaatacgcagcagaccgtaac
cattatagacggtatccacgtcgtaggggtcctccacgcaactaccagcaaaattaccag
aacagcgagagtggggaaaagaatgagggatcagacagcatgccagacggacaaggccaa
cagcgccgtccctaccgcaggcggcggtacccaccttactatatgcgtcgaccctatggg
cgtcgaccacaatattccaaccctcctgtgcagggagagatagtagagggtgctgacaac
cagggtgcaggagaacaaggcagaccagtcagacagaatatgtatcgggggtacagacca
cgatttcgcagcttgattttcaggggtcctcctcgtcaaagacagcctagggaggaagga
aatgaagaagataaagagaaccaaggggatgagacccaaggtcagcagccacctcaacgt
cggtaccgtcgtaacttcaactaccgacgcagacgcccagagaaccctaaaccacaagat
ggcaaagagacaaaggcagccgaaccaccagctgagaacacgtccgctcccgaggctgag
cagggcggggctgagtaa
DBGET
integrated database retrieval system
