Carettochelys insculpta (pitted-shelled turtle): 142025626
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Entry
142025626 CDS
T11194
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ciz03037
]
142025626 (NPHP4)
Cilium and associated proteins [BR:
ciz03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
142025626 (NPHP4)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142025626
NCBI-ProteinID:
XP_074874263
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Position
23:complement(21556568..21668554)
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AA seq
1447 aa
AA seq
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MSEWQRIFVQNLAIPPHCQRRRHPPRKSTAFQCALKYVEGNLIKQRVLEGLSEVEYQLRL
SLFDITYRHFFGRTWKSTPRPLKVVPGQLPKVVFNETLYFHTSLNHPSIVAVVEVVVAAK
KREGTLQDLSIGFGILPLFNSKSEPSDVATKDRGLKLYHGTPRALLHPLLQDPIEQNKYM
TMVENIHLQYTLRLHPPLETMSHLFPENMLVSGLQKIPGLLLTHGETNDFLRKPHLMKSV
TWYLDKLSINLYPSLEKFEEELLDLLNSDRLLKDSSAVNVSEVIIQERRLHIGVHNGLRF
VQTPQVAVVVPETEVARGRSASFHRKQGPSAKPSMVGQALVLRSRIHLTEMVRHPAFAII
FQLEYVFCASSGADRKALSISSLIKAAYMHSIRWAVWNPLLDSSSMDVTVPLQGGAQHNP
SHVLVYKMPPASMSSEEVKQVQSGTVQFHFSTDAEEHLGTFTDSLRNIREEPVHSAKPST
LSLSAPSSPQLLASTQDYPQGPGLSMSQLSASPRSPPVSPSTKPPMQRQAGFPVPRSPGR
GQHGCAVRALIQELPDGGGGITHLEVDLGHSSLALDSSASDQLQELPFAPVHAPIVAMGT
QSGSSSSVLTRASLSRLHAAGFPEILDCNKEPAEVVDPTDPVNVNPQREEADFLQSNEII
LQFLAFSRISQNGLGTTWPKTMYFTFQFYRFPPVTTPRLQLVKVDQSGTASSAASSYILV
QINKDGTLKSGSPGFQLKYMVDPAFLKPGEQRWFIRYIADHNLQIDIWDGDSLLLIGSAA
VKLKHLLRQSRTAVQVLHELEVMTTEYEQDTTVMSGDILRHGTVKPIGVYTVVRGRLHLN
LANVGHLCEQRLKKSNSLPPSRSRVISSHDGTSSFHGGSLLSLNSPGAKNVCQAQKLADL
DSELAAMLSSRLQEVSTAFQHTSREASAVRRRKIERMMMVRQLEAKEAGVNGRRASLMGR
REERIQHSRDLQIIDAYRERIKDESISSMLSQAITTNYTLYAMLGTAEFFEFALKNPYNI
QHTVTIESDHPELSVIVDSREWRHFKELTQTITTPVEEDMFHLQGNLMPQVYLRPKETIH
IPFKYQTFSVEHAVMMQQGPAELGFNKGTEAASPWKSSAMLTKRIKVSFKANGDKPIAIL
SVNVEPQPHVVDQTFRFYHPELTFLKKSIRLPPWHTLPGAPAGMPGGEPEMYVRCSDPNV
ICETKNMGPGEPQDVFLKVAGGPSPQIKRFFVAIYTDSWLAAPIQIWQFYLHSLHRVDVS
CITGQLSRLSLVLRGTQTIRKVRAYTSHMQELKVDPEGVFILPPNGVQDLHIGVRPQKAG
SRFIYLNLVDVEYHQLVSSWLVCVSCRQPVISKAFEIALPAGGGKGSNKRITYTNPYPSR
RMYFLHTNRADLLQFKEDSFEIGGGETYTIGLRFAPSQNTGEEEILIYINDHEDKNEETF
CVKVAYQ
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatggcaaaggatttttgtgcaaaatctggctattcctccacactgccagagg
agacgacatcccccgaggaaatcaacagcatttcagtgtgccctgaaatatgtggagggg
aatttaattaagcagagagtgctcgaaggcttgtctgaggttgaataccagctccgcctg
tccctctttgacatcacatatcgtcatttctttgggagaacatggaaaagtaccccaaga
cctctcaaagttgtgccaggacagctgcccaaagtggttttcaatgagactctctatttc
cacacctctttaaaccaccccagtattgttgccgtggtggaagtggtggttgcagccaag
aagcgagaggggaccctccaggatctgtccattgggtttggaatcctacccctgttcaac
agcaagtcagaaccaagtgatgtggccacaaaggacagagggctcaagctgtaccatggg
acaccacgagcactcctgcatcccctcctccaggacccgatagaacagaataaatacatg
accatggttgagaacattcaccttcagtacaccttacggcttcacccacccctcgagacc
atgtctcacctcttccctgagaacatgctggtgtctgggctgcagaagattcctggcttg
ctgctaacacatggagaaacaaatgatttccttcgaaaaccccacctcatgaagtccgtg
acatggtacttggataagctgtccatcaacctgtacccttcattagaaaagtttgaggaa
gagctgctggatttactcaactcagatcgattacttaaggatagctcagcagtgaatgtg
agtgaagtcatcatccaggagcggcgcctgcacattggggtccacaacggcctgcgcttt
gttcagacaccacaggtggcggtggtagtgccggagaccgaagtggcccggggacgctca
gccagcttccataggaaacaaggccccagtgccaaacccagcatggtaggtcaagctctg
gttttgagaagccgcattcatctgactgagatggtccgtcacccggcattcgcaatcatc
ttccagctggagtatgtcttttgtgcctcaagtggagctgacaggaaggcattgtccatt
tcctctttgattaaagcagcctatatgcattccatccgatgggctgtttggaatcctttg
ctggactcgagttcgatggatgtgaccgtaccattgcaaggaggtgcccagcataacccc
agccatgtgttagtttataagatgcctcccgccagcatgagctctgaagaggtgaagcag
gttcagtctggcactgtacagttccacttttccactgatgcagaggaacatcttggaacg
tttacagattccctacgtaacatcagagaagagccagtacactcagcgaagccatccaca
ctatctctgagtgcaccctcttcaccccagctgttggcttccactcaagactatcctcaa
ggacctgggttgtcaatgtcacagttgtctgcatcaccacgttctcctcccgtaagcccc
tcaaccaaacccccgatgcaacggcaagccggctttccggtcccccgctcccccggaagg
ggccagcatggatgtgcagtacgggctcttattcaggagctcccagatggaggtggtggc
ataactcacctggaggttgacctcggtcacagctccttggccctggattcctctgcaagt
gaccagctgcaggagctgcctttcgcacctgtgcatgctccgattgttgccatgggaaca
cagagtgggagctccagctctgtcctcactcgggcctcactatcacgcttgcatgctgct
ggttttccggaaatccttgattgtaataaagagccagcagaagttgtggaccctactgac
cctgtgaacgtcaacccccaaagggaagaagctgacttcttgcaaagcaatgaaatcatt
ttgcagttccttgcctttagcaggatttcacagaatggcctggggaccacgtggccaaag
accatgtatttcaccttccagttttaccgtttcccacctgtcacaacaccacgattgcag
ctggtcaaggtggaccagtctgggacagccagttcagcagcatcttcctatatcttagtg
cagatcaacaaagatggaaccctgaagagtggatctccagggtttcaactaaagtatatg
gtagatcctgctttcctgaagccaggagaacaacgctggtttatacgttatatagctgac
cataacctgcagattgatatttgggatggagattcattgcttctcattggatctgctgca
gttaagctgaagcacttgcttcgccagagtcggacagcagttcaggtccttcatgagctg
gaagtgatgacaaccgaatacgagcaggacacaactgtgatgagtggggacattctcaga
catggcaccgtgaagcccataggagtctacactgttgtgagaggcaggcttcacctgaat
ttggccaatgtcggtcacctgtgtgagcagaggctgaagaagtcaaactccttgccacct
tcccgctctcgtgttatctcctcgcatgatgggaccagcagcttccatggaggcagcttg
ttatccctcaacagccctggtgctaagaatgtgtgccaagcccagaagctggcggacttg
gacagcgagctggcggccatgttgtccagccgccttcaggaagtgagcacagccttccag
cacaccagccgtgaggccagcgccgtccgccggcggaagatagagcggatgatgatggtg
cggcagctggaagccaaggaggcgggtgtcaatgggaggagagccagcctcatgggccgg
cgcgaggagcgcatccagcactcccgggacctgcagattattgatgcctatcgggagcgc
attaaggacgagagcatctctagcatgctgagtcaggccatcaccaccaactacacgctc
tacgccatgctgggcacggcagagttctttgagtttgccctgaaaaacccatacaacatc
cagcacacggtgacaatcgagagcgaccacccggagctgagtgttattgtggacagtaga
gagtggagacacttcaaagagttgacccagaccattaccacaccagtagaagaggacatg
ttccatcttcagggcaacctcatgcctcaggtctacctgcgccccaaagagaccattcac
attccatttaaataccagaccttctctgtagagcatgctgtcatgatgcagcagggccca
gctgagctgggattcaataaaggcacagaagctgcatcaccctggaagtccagtgccatg
ctgacaaaacgcataaaggtctcctttaaggcaaatggtgacaagcccattgcaattctc
agtgttaacgtggagcctcagccccacgtggtggatcagacgttccgattctatcaccca
gagctcaccttcctgaagaagtccatacggttacctccatggcacaccctgccaggtgcc
ccagcaggcatgccaggtggggaacccgagatgtacgtccgctgcagtgaccccaacgtc
atttgtgagacaaaaaatatgggtccaggagagccacaagatgtgtttttaaaagtagct
ggaggaccaagcccacagatcaaaagattttttgttgctatttacacggactcgtggctt
gctgctcccattcagatctggcagttttaccttcactccctgcatcgtgtggatgtcagc
tgcataactggccagctgagccgcctctccctggttctcaggggcacccagacgattagg
aaagtcagagcctatacttcgcatatgcaggagctgaaggtggatccagaaggcgtgttt
atcctccctccaaatggggtgcaggacctgcatattggtgtgaggccccagaaagctggc
agcagatttatttacctcaatcttgtcgatgtggaataccaccagcttgtttcgtcctgg
ctggtgtgcgtctcctgccgacagcctgtcatttctaaggcatttgaaatcgcactccct
gctggtggagggaaaggctccaacaagcggatcacatacacgaacccttatccctccagg
aggatgtacttcctgcataccaaccgagcagacctgctgcagttcaaggaggactccttt
gagattggaggtggggagacatacaccattggcttgaggtttgcaccaagccagaacacc
ggtgaggaggagattctgatttacatcaatgaccatgaagacaagaatgaagaaaccttt
tgtgtgaaggttgcctatcaataa
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