Carettochelys insculpta (pitted-shelled turtle): 142025643
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Entry
142025643 CDS
T11194
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ciz03036
]
142025643 (CHD5)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
142025643 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
142025643
NCBI-ProteinID:
XP_074874301
LinkDB
All DBs
Position
23:complement(21781930..21858998)
Genome browser
AA seq
1962 aa
AA seq
DB search
MLEGLEEFYPEEPMTAQKKKKSKKLKENKTLKVKRRKKEGSNDEISENEEELDEKSDSEG
SDYSPNKKKKKKLKEKREKKAKRKKKDEEDDDNEEGGLKEPKSSAQLMEEWGLDDVDYIF
SEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAA
AAVAAAVETVTIAPQLSASPQPAALPMTIRKAKTKEGKGPGVRKKIKGAKDGKKKGKGKK
VASLKFRFGGIANKRKKGSSSEEEEREESDLDSASINSSSVRSECSAGLGRRGKRRRKRK
RTEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKE
GIQWEPKDEEEEDDEGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIP
NGEWLCPRCTCPPLKGKVQRILHWVWREPPAPFLSVLPPSDLELAVPPPKPLEGIPEREF
FVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEEGKSEKRKSK
DPQYARMEEKYYRYGIKPEWMVIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDI
PYYESLKQIYWNHRELMLGEDTQAPKRLNKKGRKLKEEKPEKPPETPIVDPTVKFDKQPW
YIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGP
YLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRAVIRENEFSFEDNAIRSGKKVFRM
KKEAQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYK
LLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRR
LKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKK
CCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTK
MLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT
ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHL
VVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGIMSQGQRLTMPDPVTPFPEAPSSK
GGAVTPNMKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLS
SFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIR
KQVNYNDASQEDQEWQDELSDNQSEYSVGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDK
PLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRA
YVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYST
PDLIPEGPEGKKANEVVSSDPNTPVPASPAHMQTGPAAQPDKAEGPLGFQEEKEQLEPKP
KKMAESQGLGSAEKAETEENPESCGNEERPREKKAEDSEKAELLLPVKEEAIPEKEKPLE
KAELNACPGKGEDKEFKPEDTKVEEKEQSETQQNGEKEEEEDGKKEDKNMNFRFMFNIAD
GGFTELHTLWQNEERAAISSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYMILN
EPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMSQDPNHPAMALNARL
AEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVA
ARLQMSERSILSRLTNRGGDPTVQQGTFGSSQLYSNNFGPNFRGPGPGGIVNYSQMPLGP
YVTATPNGPPASHPDKKVAESLKEGAALERKGKLGDIICIED
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atgctggaagggctggaggaattttatccggaggagccgatgactgcccagaagaaaaag
aaatccaaaaagctgaaagaaaacaagactttgaaagtcaagagaaggaagaaagagggg
agtaatgatgaaatatctgaaaatgaagaggaactggacgagaagtctgacagtgaaggg
agtgactattcacctaacaaaaagaagaagaagaagctcaaagaaaagagagagaaaaaa
gccaagcgaaagaagaaagatgaggaagacgatgataatgaggaaggaggtttaaaggag
cccaagagctcagcacagctgatggaggaatggggcctggatgatgtggattatatattc
tccgaagaagattaccataccctgactaattacaaggctttcagtcagtttctcaggcct
ctcattgccaagaagaatcccaaaatccctatgtccaagatgatgacggtgcttggtgcc
aagtggcgagagttcagcgccaacaacccgttcaagggcagctcagcagccgcggcagca
gctgcagtggcagcagctgtggaaacagtcaccattgcaccacagctttccgccagtcct
cagccggctgctctgcccatgaccatccggaaagctaaaaccaaggagggcaaaggccca
ggcgtgcggaagaagatcaagggtgccaaagatgggaagaaaaaagggaaggggaaaaag
gtggccagcctgaaattccggtttggaggaattgccaacaaaaggaaaaaaggctcctca
agtgaagaggaagagcgtgaggagtcggacttggacagcgccagcatcaacagctcgtcg
gtgcgctccgagtgctcggccggcctggggaggagagggaagaggcggcgaaagagaaag
aggactgaggagggggatggatatgagaccgaccaccaggattactgcgaggtctgccag
cagggaggggagattatcctgtgcgacacctgccctcgtgcctaccacctcgtctgcctg
gatcccgagctggagaaagcaccggagggcaagtggagctgccctcactgcgagaaggaa
gggatccagtgggagccgaaggatgaggaggaggaggacgatgaggggggtgaagaggag
gaagatgaccacatggagttctgccgggtgtgtaaggatggaggagagttgctgtgctgt
gacacctgcccgtcttcgtatcacctgcactgcctgaacccgcctctgccggagatccca
aacggtgaatggctctgccctcgctgtacatgccctcccttaaaaggcaaagtccaacgt
atcctgcactgggtctggagagagccccctgcccccttcctgtctgtgctgcctccatct
gatctggagctggccgtccctccaccaaagcccctggaagggatcccagagagggagttc
tttgtgaagtgggcaggactctcctactggcactgctcctgggtcaaggagcttcagctg
gagctctatcacacggtgatgtaccgcaactaccaaagaaagaacgacatggacgagccc
ccagcctttgactacggctctggggacgaggagggaaagagtgaaaaacggaagagcaaa
gacccccagtacgccaggatggaggagaagtactaccgctatggcatcaagcctgagtgg
atggtgattcaccgaatcctgaaccacagctttgataaaaagggagatgtgcattatctg
atcaagtggaaggatttaccctatgaccagtgcacctgggagattgatgacatagacatc
ccgtactatgaaagcctgaaacagatttactggaatcacagggagctgatgttgggggaa
gatacccaagcaccaaagaggctgaacaagaaagggagaaaactgaaggaagagaaacca
gaaaaacctccagaaactccgattgttgatcctacagtgaaatttgacaagcagccgtgg
tatattgatgcaacaggcggcaccttacacccataccagctagagggactgaactggctg
aggttttcctgggcccaggggaccgataccattcttgctgatgagatggggctggggaag
acggtgcagaccatcgtgttcctgtactccctgtacaaagagggccactcgaaagggccc
tatctggtcagcgcccctctctccactattatcaactgggagcgagaatttgagatgtgg
gcccctgacttctacgtggtgacctacacaggggataaggaaagccgggcggtgatccga
gaaaacgagttctccttcgaagacaatgccatccggagtgggaagaaggttttccgaatg
aaaaaagaagcccagattaaattccatgtcctgctcacgtcctacgagctgatcactatt
gatcaggccattctgggctccatagaatgggcgtgtttggtggtggatgaagctcacagg
ctgaagaacaaccagtccaaattcttcagggtactgaacagctacaagattgactacaag
ctgctgctgacgggcacgccgctccagaacaacttagaggagcttttccacctgctcaat
tttctgacgccggagaggtttaacaacctggaaggattcctggaggagtttgcagacatc
tccaaggaggaccagattaaaaaactccacgatctgttgggtccccatatgctccggcga
ttgaaggcagacgtgttcaagaacatgcctgcaaaaacagagctgattgtgagggtggag
ctgagccagatgcagaagaagtactacaagttcatcttgactcggaattttgaagccctg
aattccaagggtggtgggaaccaggtctcactgctcaatatcatgatggatttgaagaag
tgttgtaatcacccgtacctctttcctgtggcagctgtggaggctccggtgctgccaaat
ggatcctatgatgggaattctttggttaaatcctctgggaaactgatgctgctgcaaaag
atgctgaagaaactgcgagacgggggacacagggtcctgatcttctcccagatgacgaaa
atgctggatttgctggaggatttcctggagtatgagggttataagtacgagcggatagac
ggaggcatcacaggaggcttgcgccaagaggccattgacaggtttaacgctcctggagct
cagcagttctgttttcttctctctacccgagcggggggtctgggcatcaatctggcaaca
gccgacaccgtcattatttacgactctgattggaatccccacaatgacatccaggcattc
agcagagctcaccgcatcggccagaacaagaaggtgatgatctaccgctttgtgacgagg
gcctcggtggaggagcgcatcacccaggtggccaagaggaagatgatgctgacccacctg
gttgtccggccggggctgggctccaaatcgggctccatgactaagcaggagctggacgac
attctcaagttcgggacggaggagctcttcaaagacgacgtggagggcataatgtcccag
ggccagcggctcaccatgcctgacccggtgaccccctttcctgaagcaccgtcgtccaaa
gggggcgctgtgactcccaacatgaaaaagaaacatggcagcactccacctggggacaac
aaggacgtggaggacagcagcgtgatccactatgacgacgctgccatctccaagctcctg
gatcgcaaccaggacgccacagatgacaccgagctgcagaacatgaacgagtatctcagc
tcctttaaagtggcccagtatgttgtgcgagaagaggacggtgtggaggaggtggagcga
gagatcatcaaacaggaggagaacgtggaccccgactactgggagaagctgctcaggcac
cattacgagcagcagcaggaggacctggccaggaacctgggcaaagggaagaggatccgc
aagcaggtcaactacaacgatgcctcccaagaggaccaagaatggcaggacgaactgtcc
gacaaccagtctgaatactccgtcggctccgaggacgaggatgaagactttgaggaaaga
cccgaaggtcagagtggcaggagacagtcccggaggcagctgaagagtgaccgagacaag
cctctcccgcctctgctggcaagagttggggggaacattgaggtgctcgggtttaacgcc
cggcagcgcaaggcgttcctgaatgctatcatgcggtggggcatgccgccccaggatgcc
ttcaactcacactggctggtccgggacctccgtgggaaaagcgagaaggagttcagggcg
tacgtctcattgtttatgagacatttatgtgagcccggagcagacggggctgaaaccttt
gcggacggcgttccccgggaagggctctcgcgccagcatgtgctgacgaggatcggagtc
atgtcactagtaaggaagaaggtgcaggaatttgagcatgtcaatgggaagtacagcacc
cctgatctgatcccagaggggccggagggcaagaaagccaacgaggttgtctcttccgat
cccaacactcccgtcccagccagcccagcacatatgcagactgggccagcggcacagcca
gacaaagcagaagggcccctgggcttccaagaggaaaaggaacagctggagccaaagccc
aagaagatggctgagagccaggggctgggaagtgcagagaaagctgagaccgaggagaac
ccggagagctgcggaaacgaagagagaccgagagagaagaaagcagaagacagcgagaag
gctgagctgttgctgccagtgaaagaggaggcaattccagaaaaagaaaagcccctggaa
aaggcagaattaaatgcctgcccagggaaaggggaggacaaagagttcaagccagaggat
accaaggtggaagagaaggagcagagtgagactcagcaaaatggtgaaaaagaggaagag
gaggatgggaagaaggaggataaaaatatgaactttagattcatgttcaacattgctgat
ggcggctttacagagttgcacacactgtggcagaacgaggagagagctgccatctcctcg
ggcaagatctatgacatctggcaccggcggcacgactactggctgctggcgggaattgtc
acccacggctatgcccgctggcaggacatccagaatgacccgcgctacatgattctgaac
gagcccttcaagtcggagatacacaaggggaactacctggagatgaagaacaagttcctc
gcccgacggttcaagctgctggagcaggccctggtgatagaggaacagttgcgaagggcg
gcgtacctcaacatgagccaggaccccaatcatccggccatggccctgaatgcccgtctg
gctgaagtggagtgccttgctgaaagccaccagcacctctccaaagagtccctggctggg
aacaagccagccaacgctgtcctgcacaaagttctgaaccagcttgaggagctgctgagc
gacatgaaggcggatgtgacccgcctgccttccatgctctccaggataccaccagtggcc
gctcgcctgcagatgtctgaacggagcatcctgagtcgcctcactaaccgtggaggagac
cccactgtccagcagggtacttttggatcctcccagctctacagcaacaactttgggcca
aatttccgagggccggggcccggtgggattgtcaactacagtcagatgccactgggacct
tatgtaaccgcaacacccaatgggccgcccgccagccaccctgataaaaaagtagccgag
tcactgaaagagggcgcagccttggaacgcaaagggaagcttggggatatcatctgcatt
gaagactaa
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