Cellvibrio japonicus: CJA_0042
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Entry
CJA_0042 CDS
T00721
Symbol
pel1D
Name
(GenBank) pectate lyase, putative, pel1D
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cja
Cellvibrio japonicus
Pathway
cja00040
Pentose and glucuronate interconversions
cja01100
Metabolic pathways
cja02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CJA_0042 (pel1D)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CJA_0042 (pel1D)
Enzymes [BR:
cja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CJA_0042 (pel1D)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ACE85280
UniProt:
B3PFC6
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Position
73344..76232
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AA seq
962 aa
AA seq
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MKIYPLLTAGLVCSLVACGGGSSGSGNQSSSVVSSSVVSVASSQPSSVVVSSSSSVIVEP
SSSSQSSDVVSSVESSSSESSVAESSESSVAESSESSQGGTESSASSESSSEASSSVAES
SVSSSEQSSAESSESSSSETSSEASSSAEALNWNVYSADYHPATNGSVTLAGGEIAEFTA
GGNGDYFVDQFDGTVVLDTSSVGTDTTSATFYNVVNAEGVYPKYFTLVAGVKGNADSLRV
LELEVAMADEAQIGSRLKAILRNDGSNKGVQLETANNGSSVNSYNVNDMDKFAIYQIAIT
LTSSTNGSVNVYRNGVLMPGLSLDNVTMRATSAASDNFVRFGEVSGSAAYKSTVDWVIWT
NQAAYSPLALDGLLPAGLGCVYGYGSSDQLETCENPPVSGGSSSSSGGANSSAASSIDHG
TAEIRPAKIEGFAAYANVTGGAGGPVITVTTGTELNAALCGVRNGNRTAPVIIMVDGTIN
HSNTTSQGCDTQNDVIEIKNTSNISIIGVGTNALFDEIGIHVRSASNIIIQNVHIRNVKK
SGSPTSNGGDAIGMETNVDRVWIDHNWLEASGGEKDGYDSLLDMKAGVTNVTVSYNIFND
SSRAGLIGSSDSDNKNNNITFHHNWYRNIEQRTPLIRHSLVHIYNNYWSTENRSAMIHGI
NSRMNAKALVESNYFYNVNNPLLASNDSKVAGCWQTNNDNTLVNHIYSRSVTNGALVIPE
IIDGQMQSTCEVTVPYTVDMDPAVNVPAIVMTNAGVGIISTEVGSSSSSSSSSSVSSQTS
SSGTSSSSPSAGTGVLVNEEFGVDKATLFSATYKAISTDSSAALYFVTGGNSGITVVNDQ
LSIVGGRFTIGHRPPRTATTASDLSANGDFDLTSPYRISFTVVSASGAGKVQVYVDNNTT
SQGNSLHSNDSKVYEVVANTLTAGQVVEITPSSIGTSTSFIAIRAESSATIVIDDLKLEY
ID
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttatcccttattgactgcggggctagtctgtagcctggtagcctgtggcggt
ggctcgtccggctccggtaaccaatcctccagtgtcgtttcttccagtgttgtatctgtt
gcctcaagtcaaccatcatctgtagtggtttccagctcctccagtgtgattgttgagcca
tcatccagctcacaaagcagtgacgttgtctcttctgttgagtcctcatccagcgagagc
tctgtggcagaatccagtgaaagttctgtcgctgagtccagcgaatcttcccaagggggt
acagagtccagtgcctcttccgaaagcagcagtgaagcatcctccagtgtggccgaatca
tctgtttccagtagtgagcaatcttcggctgaaagcagtgaatcctcttccagtgaaacc
agttcagaggcctcatcatccgctgaagcacttaactggaatgtgtacagcgcggactac
catccagccactaatggctccgttaccctggctggtggtgaaatagctgaatttactgcg
ggtggtaatggcgattacttcgttgatcaattcgatggcaccgtagttctggataccagt
agtgtcggcactgatacgaccagtgcaaccttctataacgtggtgaatgcagaaggtgtt
tatcccaagtacttcaccttggttgccggcgtaaaaggcaatgcggacagcttgcgtgta
ttggagctggaagtggccatggccgatgaggctcaaatcggtagccgcctcaaagccatc
ttgcgtaatgatggcagtaacaaaggcgttcaactggagactgccaacaatggcagcagt
gtaaacagctataacgtcaacgatatggacaagtttgccatctaccagattgccattacc
ctgaccagctctactaacggcagtgtcaatgtgtatcgtaatggcgtattgatgcctggc
ttatcgctggataacgtcactatgcgtgctaccagcgcggcgagtgataactttgttcgc
tttggtgaagtcagtggcagtgcagcctataaatccactgtcgattgggtaatctggact
aaccaggcggcttacagtcctttggcgttggatggcctgctgcctgccggtctgggctgt
gtttatggttacggcagctccgatcaattggaaacttgtgaaaatccacctgtatctggc
ggcagcagctcatccagtggcggtgctaactcctccgcagccagcagcattgaccatgga
accgcagaaatccgtccggcaaaaatagaagggtttgctgcctatgccaatgtgaccggt
ggtgcaggtggtccggttatcacggtaacaaccggtacggaattaaacgcagccctgtgc
ggcgtgcgcaatggcaacaggactgcacccgtgatcattatggtggatggaactatcaac
cattccaataccacctcccagggttgtgatacccaaaatgatgtgattgaaatcaaaaat
accagcaatatttccattatcggtgtgggcaccaatgccttgtttgatgagattggtatc
catgtgcgtagtgcctccaacattatcatccagaatgtgcacatccgtaacgtgaagaag
agtggttcgccaacgtctaacggcggcgatgctatcggcatggaaaccaacgtggatcgc
gtgtggatcgaccacaactggcttgaagcatccggtggtgaaaaagatggttatgattcc
ttgttggatatgaaggcgggtgtaaccaacgtaaccgtgtcctacaacatattcaatgac
tccagtcgcgcgggtctgatcggttccagcgatagtgacaacaaaaacaacaatattacg
ttccaccataattggtatcgtaatattgaacagcgcacgccgttgattcgtcactcactg
gtgcatatctataacaactattggtctactgaaaatcgtagtgccatgattcatggcatc
aattcgcgtatgaatgccaaggcactggtagaaagtaattatttctacaatgtgaataac
cccctgttggccagtaatgattccaaagtggctggctgctggcagaccaataacgacaac
acgctggttaatcacatctattcgcgcagtgttactaatggtgccctggttattccggaa
attattgatggccagatgcagtctacgtgtgaagtaacggttccctataccgtagacatg
gatcctgcagtgaatgtgccggccatcgtaatgaccaatgcaggtgtgggaattatttca
acggaagtcggtagctcaagctccagttcgtcttcatcgtccgttagcagccaaacatcc
agctctggtacatcatccagttcaccgtcagcgggaacaggtgtgttggtgaatgaagag
tttggtgtagataaagccacactgttcagtgcgacttataaagctatctctactgactcc
agtgcagccctctattttgtaacagggggcaattcgggtattacggtagtcaacgaccag
ctgtcgatagtaggtggtcgtttcaccattggtcatcgtccaccacgtactgctactaca
gccagtgacctgagcgccaacggtgattttgatttaaccagtccatatcgcattagcttt
accgttgtttcagcgtcaggtgcaggtaaagtacaggtgtatgtggataacaatactact
agccagggcaattccctgcacagtaatgattccaaagtttatgaagtcgtcgctaatacg
ctaactgctggacaggtagtggaaatcacgccgtcatcaataggaacatctacatcattt
attgcaattcgtgctgaaagctcagcaacaattgtgattgatgacttgaagttggaatat
attgattag
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