Cellvibrio japonicus: CJA_0045
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Entry
CJA_0045 CDS
T00721
Symbol
pel1F
Name
(GenBank) pectate lyase, putative, pel1F
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cja
Cellvibrio japonicus
Pathway
cja00040
Pentose and glucuronate interconversions
cja01100
Metabolic pathways
cja02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CJA_0045 (pel1F)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CJA_0045 (pel1F)
Enzymes [BR:
cja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CJA_0045 (pel1F)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
fn3
SPP1_Dit
Motif
Other DBs
NCBI-ProteinID:
ACE84412
UniProt:
B3PFC9
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Position
83436..85286
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AA seq
616 aa
AA seq
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MQVTSMKTSLQAAAWLLGTGLFCATGLHAQTLGSNLSLTGPGAGADGSGFSDTKLVRDGS
INTYTQASGTVNQRVSVKWSSAQTFNTVILRESGNRITNWQLVNNDTGAVLATGTGIGAA
RTVNLGSVSMKKINLIANGSSPLQMAEIEVYNATSTASSSSATGGTSSAANSSAAAGGVN
LTGSAGNGQVALNWTVTPAINAQEIYIDTDSDPAGRTRIASPGTSVRTYTATGLNNGTNY
WFWVKYRTTDGVWHNSNAFSATPVGGTTSSSSSSSSSATSSTPSGGTGLMSCSQANTVRG
FAALGGGTTGGEGGTTVTVTTGAQLVAALATKKNNPTPLKIYVNGTITPANSGGANQFDV
KDMANVSILGVGSNALFDGIGINIVRANNIIVRNVKIRYNRIGQKDAVSIQGTSKNVWID
HNEFHNSLDVNKDYYDELVSGKNQIDNITISYNYLHDSWKTSLWGSGDSDSYDRRVTFVG
NRLENVNSRLPLFRFGQAHVYNNYYLNVLETGINSRMGARIRIEGNYFENVKNPILSKDS
SQIGYWDLGNSDTNAYVNVNWEPSTCSGESACVVAGPGVSSTVNYTPPYSYSVMTATAAK
THVLNNAGVGKLSGCL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtaacttctatgaaaacctcactacaggcagctgcatggctgttaggtaccggt
ttgttttgtgcaaccggtttgcatgcccaaaccctgggttccaacttatccctgaccggc
cctggtgccggtgcagatggttccggttttagtgataccaagctggtgcgcgatggcagt
atcaatacctatacccaggccagcggtaccgtaaaccaacgtgtttcagtcaagtggagc
agtgcccaaacctttaacacggtgattttgcgtgagtcgggtaaccgtattaccaattgg
cagctcgttaacaacgacacaggtgctgtcctggcgacaggaaccgggatcggtgctgcg
cgcactgttaacctgggctctgtgtccatgaaaaaaatcaatctgattgcaaatggtagt
tcaccattgcaaatggcagagattgaagtttataacgcaacctctacggcatcttcatcc
agtgccacaggtggtaccagctctgctgccaacagcagtgcagctgcagggggcgttaac
ctgacgggttcggcagggaacgggcaggtagcacttaactggaccgtgactccggcaatt
aatgcacaggaaatttatatagatacagattctgatcctgcaggtcgtacacgtattgca
tcaccaggtactagtgtgcgcacttatacagcgacaggcttgaataacggaactaattat
tggttctgggtgaaataccgtactaccgatggtgtgtggcataactccaatgcgtttagc
gcaaccccggtgggtggtacaaccagctcttcttcctcttcatccagttcggctacaagc
agtacgccgtctggtggtacaggtttgatgtcctgcagccaggcgaatacggtgcgcggt
tttgcggcgctgggtggcggaactaccggtggtgaaggtggtactacggtgacggtgaca
accggtgcgcaattggtggcagcattggcaaccaagaagaacaatccaacaccgctcaag
atttatgtgaatggcactattacaccggcgaacagtggaggcgccaaccagtttgatgtg
aaggatatggcgaatgtgtccattctcggtgtgggtagcaatgcgctctttgacgggata
ggcatcaatattgtgcgcgctaataacatcatcgtgcgcaatgtgaagatccgttataac
cgcattggccagaaggatgcggttagtatccagggtacttccaagaatgtctggattgac
cacaatgagtttcacaatagccttgacgtcaataaggattattatgatgagctggtcagt
ggcaaaaaccagattgataacatcaccatttcctacaactatttgcatgacagctggaag
acatcgctgtggggctccggtgatagcgatagctatgatcgccgtgtgacctttgtcggt
aaccgcctggaaaatgtgaattcacgtctgcccctgttccgttttggtcaggcacatgtc
tacaacaactattacctgaatgtgcttgaaaccggaatcaattcacgtatgggcgcgcgc
attcgtatcgaaggcaattatttcgaaaatgtaaaaaacccgatcctcagcaaggacagt
tcacaaattggctattgggatcttggcaacagtgataccaatgcctatgtaaatgtgaat
tgggaaccttcgacctgtagtggcgaatccgcttgtgtggttgcagggccgggcgtcagt
tcaacagttaactacactccaccttattcttactcggtaatgaccgctacggcggcaaaa
acgcacgtattgaataacgcgggtgtgggtaagttgagcggttgcttatag
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