Cellvibrio japonicus: CJA_0053
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Entry
CJA_0053 CDS
T00721
Symbol
pel1E
Name
(GenBank) pectate lyase, putative, pel1E
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cja
Cellvibrio japonicus
Pathway
cja00040
Pentose and glucuronate interconversions
cja01100
Metabolic pathways
cja02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CJA_0053 (pel1E)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CJA_0053 (pel1E)
Enzymes [BR:
cja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CJA_0053 (pel1E)
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ACE86114
UniProt:
B3PFD7
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Position
95000..97042
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AA seq
680 aa
AA seq
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MSSSQRISAWALGSLLSASALLSLPLHAQTLGANLALTGPSAGADGSGFSNTKLVRDGNT
GTASPASGTSNQRVSVKWGSAISFNTVILREQGTRITSWQLVNNDNGTLLASGTGIGAER
IVSLGNVSSKKINLIVNATAAPSLAEFEVYNATGVISSSSSSQAVSSSSQPVSSSSVRSS
SSSSSSSVVVSSPPSSVSSSRSSSSAQSSVGGLSAACISLATNSNVNWRDTSLQSDQEIV
ECLSRTLGKPVGYGENALGGYNPSGGSKLTIIRKNTGVSVEQQILNAITDNNHNWIVFDK
VDFAQPSEIGMYRLGCNNATVQSILGATEAECVNYTQWCSKNNISSAACVNEFFNKAMNK
SNNPIRNPVIGSNKTIDGRGSEAYFLFSGFAIGKDSTGTPTQTANNVILTHLRFQGAGHT
EDHYVDPDMIRSTGASRDIWIHKNTFDTTGDSAFDVKVGAYNITMSFNKIVDVKRATLHS
SSDSHTIDSQIRTTMHHNLFVTRDASYSALGNTLRRVPLIRRGTSHMFNNAFINYRKDLL
SIRVGASVLQEDNMFVVNRIHQEKSSLAAALAELQSNLIRDVNGGNYRGEGNFLWFSDGA
CNLDQTTKTGFTVSSGTVANLSNNYTAASRTTINNWRFAAGQDLVDYLSATAGKYGQYAF
NSPLSGDRYYVLGLGKVSCL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctctcaacgcattagcgcttgggcgctgggttctttactaagtgccagcgca
cttttatcccttccactgcatgcccaaaccctcggtgcaaaccttgcactcactggcccc
agtgccggtgccgatggttcaggctttagtaacaccaagctggtccgcgatggcaacaca
gggactgccagccctgccagtggcaccagcaaccagcgtgtttctgtgaaatggggttct
gccatcagcttcaacaccgtcatcctgcgcgagcagggtacccggattaccagctggcag
ttggtgaataacgataacggaaccttgctggccagtggtaccggcataggcgcagagcgt
atcgtgtcgctcggcaatgtcagctccaaaaaaattaacctgattgtgaatgctacggcg
gcgccctcccttgccgaattcgaggtttacaacgcaacgggtgtgatcagttccagctcc
agcagccaggcggtgtccagctccagtcagccagtgtcttccagttctgttcgctcatcc
tcatcctcgtcttccagcagtgttgtggtgagcagcccgccatcatcggtatccagcagt
cgctcttcatcctcggcgcaatccagtgtgggcggcttgagtgcggcctgtatttcactg
gcaaccaactccaacgtgaactggcgtgatacctccctgcaatccgaccaggaaattgta
gagtgcctgtcgcgcaccctgggtaaacccgtgggctacggtgaaaatgccctgggtggc
tacaaccccagcggcggtagcaagttgacgattatccgtaagaacaccggggtgtcggta
gagcagcaaatccttaatgccattaccgataacaaccacaactggattgtgttcgacaaa
gtcgatttcgcccagccttctgaaatcggtatgtatcgtctcggttgtaacaacgcaacg
gtacagtccatcctgggcgctaccgaagctgagtgtgtgaattacacccagtggtgttcg
aaaaacaatatcagtagtgcagcctgtgtgaatgaatttttcaacaaggcgatgaacaag
tcgaataacccgattcgcaacccggtgatcggttctaacaaaaccatcgatggccgtggt
agcgaggcttacttcctgttcagcggttttgcaattggtaaagactctaccggtacaccg
acacaaacggctaacaatgtgatcctgacgcacttgcgcttccagggggctggccatacc
gaagaccattacgttgacccggatatgattcgttccactggtgcttcacgcgatatctgg
attcacaaaaacacctttgatactacgggtgattcggcctttgacgtaaaagtgggcgct
tacaacatcactatgtcgttcaataaaattgtggatgtgaaacgcgcaacactgcacagc
tccagcgacagccacacgatcgattctcaaatcagaaccacgatgcaccacaatctgttt
gtaacccgcgatgccagctactcagccctgggtaataccctgcgccgtgtaccactgatt
cgccgtggtacatcacacatgtttaacaatgcgtttatcaactatcgcaaagacctgctg
agtattcgtgtaggcgccagtgtgttgcaagaagacaatatgtttgtggtgaaccgtatc
catcaagagaagagttcactggctgctgctttggcagaactgcaatccaacctgatccgg
gatgttaatggtggtaactatcgcggcgaaggaaacttcctgtggttcagtgacggtgcc
tgtaatctcgatcaaaccaccaaaaccgggtttactgtcagctctggtaccgtggctaat
ctcagcaacaactacaccgctgcctcgcgtacaaccattaataactggcgttttgcggcc
ggccaggatttggtggattacctgagtgcaaccgcgggtaaatacggtcaatacgccttt
aactcacccctgtcgggtgatcgctattacgtattgggattgggtaaagtgtcctgcctg
taa
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