Cellvibrio japonicus: CJA_0125
Help
Entry
CJA_0125 CDS
T00721
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cja
Cellvibrio japonicus
Pathway
cja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJA_0125 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cja03019
]
CJA_0125 (recQ)
03400 DNA repair and recombination proteins [BR:
cja03400
]
CJA_0125 (recQ)
Enzymes [BR:
cja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CJA_0125 (recQ)
Messenger RNA biogenesis [BR:
cja03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CJA_0125 (recQ)
DNA repair and recombination proteins [BR:
cja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CJA_0125 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACE84059
UniProt:
B3PFK9
LinkDB
All DBs
Position
164022..165848
Genome browser
AA seq
608 aa
AA seq
DB search
MSTINTVQTSPQAVLHQVFGYHEFRGPQEAVIHALVAGEDALVLMPTGGGKSLCYQIPAL
VREGVAVVVSPLIALMQDQVNALREVGVRAGFLNSTLSSQEWWQTESALQRGELDLLYIA
PERLIQPRTLELLHGLTIALFAIDEAHCVSQWGHDFRADYLKLDLLPREFPRVPRIALTA
TADLRTRDEIVERLQLHNARQFISGFDRPNIQYRIAQKNNPKIQLMRFLREEQAGNSGIV
YCLSRNKVEQIAEWLCSEGFNALPYHAGLSASIRQQHQEKFLREDNIIMVATIAFGMGID
KPDVRFVAHLDLPKSIEAYYQETGRAGRDGETATTLLLYGLEDVIKLRQMMSQSEGSEEF
KRNEQQRLNAMLGLCEITSCRRQSLLRYFGDHLVQPCGNCDNCLIPPQTWDGSEAVQMAL
SCVYRTGQRFGAGHVIDVLRGSNNEKVLQFDHHRLSTYGIGKHLSVDEWKSIFRQLVARG
LLDVNSDGFGGLLLNEGCRPYLRGEERLLLRREAKSIANSPRRANLSQDIANEDQSLWQA
LRACRKRLAEEQGVPPYVIFHDSTLREMLEFRPLTLDQLRGITGVGESKLKRFGEEFLTV
LREAEYQG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgattaataccgtgcaaacctcaccacaggcagttttgcaccaggtcttcggc
taccacgaattccgcggcccgcaagaggcggttattcatgccctggttgcgggggaggat
gcactggtattaatgccaaccggtggtggtaaatccttgtgttaccagatacccgccctg
gtacgagagggcgttgcggttgtggtatcaccgttgattgcattgatgcaggatcaggtc
aatgccctgcgagaggtgggtgtgcgcgccggttttttaaattctaccctgtcctcgcag
gagtggtggcagacagaatctgccttgcagcgcggggaactggatttgctgtacattgcc
cccgagcgcttgatccagccgcgtacactggaattgctccatggattaaccattgccctg
tttgccatcgatgaggcccattgtgtatcgcaatggggacatgatttccgggcagattac
ctcaagctggatttgttaccgcgcgagtttccccgtgttccgcgcatagccctgacagcg
accgccgacttgcgtacccgcgatgaaattgtcgagcgtttgcagttgcacaatgcccgg
cagtttatcagtggttttgatcgccccaatatccaataccgcattgcgcagaaaaacaat
cccaaaatccaattgatgcgcttcttgcgcgaggagcaggccggcaattccggcattgtt
tattgtttgtcgcgtaataaggtagagcagattgccgagtggttgtgtagcgaaggtttt
aatgccttgccctaccatgcggggttatcagcgagcatacgccaacaacaccaggagaaa
ttcctgcgcgaagataacattatcatggtggccactatcgctttcggaatgggtattgat
aagccggatgtgcgttttgtagcacacctggatttaccgaaaagcattgaggcctactac
caggaaaccggtcgcgccggtcgcgatggggaaacggcgacaaccttattattgtatggt
ttggaagatgtcatcaagctgcgccagatgatgtcgcaatcagagggcagcgaggaattc
aaacgcaatgaacagcaacggttgaacgccatgttagggctgtgcgaaattaccagttgc
cgccgccagagtttgttgcgttatttcggcgatcacctggtacagccttgtggtaattgt
gataactgcctgataccaccccaaacctgggatggcagtgaggcggtacaaatggccctg
tcctgtgtttatcgcacagggcagcgttttggtgccgggcatgtcatcgatgtgctgcgc
ggtagtaacaacgagaaggtgctgcaattcgatcatcatagactttccacctatggcata
ggcaagcatctcagtgtggatgaatggaaatctatttttcgccagttggtggcgcgtgga
ttgctggatgtgaatagcgatggttttggcggtttgttattgaatgaaggttgccgtccc
tatttgcgcggagaggagcggctgttgctgcgtcgcgaagccaaaagcattgccaattcg
ccgcgtcgcgccaacttgtcacaagatatcgccaatgaagaccagtcgctatggcaggca
ttgcgcgcatgccgcaaacgtttggcagaagagcagggggttcccccctatgttattttt
cacgatagcaccctgcgtgaaatgttggagtttcgtccactaacactggatcaattgcgt
ggcattaccggggtgggtgaaagtaaattaaaacgttttggtgaagagttcctcacggta
ttgcgcgaggctgaatatcaggggtga
DBGET
integrated database retrieval system
