Cellvibrio japonicus: CJA_0361
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Entry
CJA_0361 CDS
T00721
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cja
Cellvibrio japonicus
Pathway
cja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJA_0361 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cja03021
]
CJA_0361 (rho)
03019 Messenger RNA biogenesis [BR:
cja03019
]
CJA_0361 (rho)
Transcription machinery [BR:
cja03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CJA_0361 (rho)
Messenger RNA biogenesis [BR:
cja03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CJA_0361 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
S1CSD-TOTE-2
AAA_22
ResIII
Mor
Fungal_virus_P2_C
AAA
Motif
Other DBs
NCBI-ProteinID:
ACE85958
UniProt:
B3PI22
LinkDB
All DBs
Position
454377..455636
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTDLKKKPIEELIDIAHGMGLENIARSRKQDIIFNILKRHAKGGEDIYGDGVLEILVD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNDIN
FDKPENSRNKILFENLTPLFPNERILLEAGNGSTEDLTGRIIDLIAPIGKGQRGLIVAPP
KAGKTIMMQNIAQAITRNNPECHLIVLLIDERPEEVTEMQRSVRGEVVASTFDEPPARHV
QVADMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLSIIATALVDTGSKMDEVIYEEFKGTGNLELHLDRKLAEKRVYPAINI
RRSGTRREDLLMKEDEQQRVWILRRLLNDMEDIAATEFLIDKLKDFKTNDEFFLSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaccttaaaaagaaacccattgaagaattaatcgatatcgcccatggc
atgggtttggaaaatatcgcccgctcgcgcaaacaggatattatttttaatatccttaag
cgccacgccaaaggtggtgaagatatttacggcgatggtgtattggagatattagtggat
ggattcggctttctgcgctcagcagacagctcttatctggcaggccccgatgacatctat
gtttcgcccagccagatccgccgctttaacctgcgcaccggcgatacaatttctggcaag
attcgccctcccaaagaaggtgagcgctattttgccctgttgaaagttaatgacattaac
ttcgacaaacctgaaaactcccgcaacaaaatcctgtttgaaaacctcacccccttattc
cctaacgagcgcatcttgctggaagccggtaatggttccaccgaagacctgaccggtcga
atcatcgatctgattgcgcctattggtaagggccagcgcggtttgattgtggcgccgccc
aaggccggtaagaccatcatgatgcagaatattgcacaggcgattacgcgcaataatccc
gaatgccatctgattgtattgctgatcgacgagcgcccggaagaagtgactgaaatgcag
cgctcggtgcgtggtgaagtggttgcctcgacctttgacgagccgcccgcacgccacgta
caggtggccgatatggtgatcgaaaaagccaagcgcctggttgagcacaaaaaagatgtg
gtcatcctgctcgactccattacccgtctggcacgtgcttacaacacggttattccctcg
tccggtaaagtgttgaccggtggtgtggatgcccatgccttggagcgtcccaagcgtttc
ttcggtgcggcgcgtaatattgaagaaggcggtagcctgagtattattgccacggcgctg
gtggataccggttccaaaatggacgaggttatttacgaggaattcaaaggtacaggtaac
ctcgaattgcacctggaccgcaagctggcggaaaagcgcgtgtatcccgccatcaatatc
cgtcgttccggcacacgccgtgaagacctgttgatgaaagaggatgagcagcagcgcgtg
tggatcttgcgccgcctgttgaacgatatggaagatatagcggcaacagaattcctgatc
gacaaactgaaagacttcaaaaccaatgatgaattcttcctgtcgatgaaacgcaaataa
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