Cellvibrio japonicus: CJA_0438
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Entry
CJA_0438 CDS
T00721
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cja
Cellvibrio japonicus
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cja03016
]
CJA_0438 (truB)
Enzymes [BR:
cja01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CJA_0438 (truB)
Transfer RNA biogenesis [BR:
cja03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CJA_0438 (truB)
Prokaryotic type
CJA_0438 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ACE85191
UniProt:
B3PI98
LinkDB
All DBs
Position
538019..538978
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AA seq
319 aa
AA seq
DB search
MAKRKGRPVDGVLLLHKPAGMTSNQALQRAKRLFFAEKAGHTGSLDPLATGVLPLCFGEA
TKFSQFLLDADKGYRTCIRLGITTDTCDADGDVLETRSAAAITRAQLDSALDAFRGNILQ
VPPMYSALKLNGQPLYKIARQGVEVEREPRAVTIHSLDVLAFRPGEVAEVELDIRCSKGT
YIRSIAEDLGRALGCGAHVKVLHRSLAGSFGEDQCIGLEQLEADYERGGYDALDAHLVSA
DAPVASLPAVDLPANSAYYFRQGNPVMDTKVYRIARQGDIVRVFCAESAQSPRQFLGLGE
ITDDGRVAPKRIIANRSAG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacgtaaaggccgccctgtcgatggtgttttgctgctccacaagcccgccggc
atgacttccaatcaggcgttgcaacgggccaagcgtttgttctttgccgaaaaggccggt
cataccgggagccttgatcctttggcgaccggggttttaccgctctgttttggtgaagcg
accaagttttcccagtttttgctggatgcggataaggggtatcgcacctgtatccgcctg
gggatcaccaccgatacctgtgatgccgatggagatgtacttgaaacgcgctctgcagct
gccattacccgcgcccagctggatagcgcactggatgccttccgcggcaatatcctgcaa
gtaccccctatgtattcggcgctcaagctcaatggccagccactctacaaaatagctcgc
caaggggtggaggtggagcgcgaaccgcgagcagtgactatccattcgctggatgtactg
gcatttcgccctggcgaagttgctgaggttgagctggatattcgctgtagcaaaggcacc
tatattcgctctattgccgaagacctgggacgtgccctgggctgtggtgcccatgtgaaa
gtgctgcatcgcagcctggccggatcttttggcgaggatcaatgtattggcctggagcag
ctggaggcggactacgagcggggcggctatgacgccctggatgcccatctggtcagtgcc
gatgccccggtggcgagtctgcccgccgtggacttgcctgccaacagcgcctactacttc
cgccagggcaatccggtaatggacaccaaggtctatcgcatcgcccggcaaggtgatatt
gtgcgcgtcttttgtgcagaaagcgctcaatccccgcgccagttcctgggattgggggag
atcaccgacgatggtcgtgtggcgcccaaacgtattattgccaaccgctcggccggatag
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