Cellvibrio japonicus: CJA_0452
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Entry
CJA_0452 CDS
T00721
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cja
Cellvibrio japonicus
Pathway
cja03030
DNA replication
cja03430
Mismatch repair
cja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJA_0452 (holA)
03430 Mismatch repair
CJA_0452 (holA)
03440 Homologous recombination
CJA_0452 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cja03032
]
CJA_0452 (holA)
03400 DNA repair and recombination proteins [BR:
cja03400
]
CJA_0452 (holA)
Enzymes [BR:
cja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJA_0452 (holA)
DNA replication proteins [BR:
cja03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJA_0452 (holA)
DNA repair and recombination proteins [BR:
cja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJA_0452 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
T6SS_FHA_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
ACE84409
UniProt:
B3PIB2
LinkDB
All DBs
Position
complement(554941..555990)
Genome browser
AA seq
349 aa
AA seq
DB search
MPKLRPEQLAAALTKQLAPIYLVSGDEPLLIQEACDSIRAAARKQGFGERELYHADSNFE
WGQLLSAANSLSLFAEKKIIELRMPSGKPGDKGGKILQEYAQSPAPDNLLLIVTEKLDGA
AQKSKWFKALEDAGQHIQVWPITAGNLPRWIGQRLQQAGLQADPDAIELLASRIEGNLLA
AVQEIEKLKLLANQGRINYELMASAVADSARYDVFGLTDKALHGDARAAVKTLHGLKTEG
TEPITILWAITRDIRILIQVSQAVGQGKHFDWAAKQAGVWDKRQPLIKAALNRLKPAQLQ
QLLRKANGIDKAIKGMRNAEPWDELLDLVLNIAGVQSLHPANERLSLKI
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagctgcgcccggaacaactcgctgccgcactgaccaaacagctggccccgatt
tacctggtatctggcgatgagcccctgttaatccaggaggcttgcgatagcattcgcgca
gctgcgcgcaaacagggatttggcgagcgcgagctctatcatgccgatagcaatttcgag
tgggggcagttattaagcgccgctaacagcttgtcactttttgcggaaaaaaagattatt
gaattgcgtatgcccagcggcaaaccgggagacaagggaggaaaaatcctccaggaatat
gcccaatctcccgctcctgataatttactgttgatcgttaccgaaaaacttgacggtgcc
gcgcaaaaaagcaaatggtttaaagccctggaagatgctggacagcatatccaggtttgg
ccgattaccgcaggcaatttgccgcgctggattggtcagcggttgcagcaagccggattg
caagccgacccggatgcgattgagctactggcctcccggatcgaaggcaatttgctggca
gccgtacaggaaattgaaaaactcaagttgctcgccaaccaggggcgcatcaactatgag
ctgatggcatcagccgttgcagacagcgcccgctacgatgtgtttggcctcacggacaag
gcgttacatggcgatgcacgcgctgcggtaaaaacgctacacggcctgaaaacagaaggc
acggaacccatcactatcctctgggcgataacgcgcgatatacgtatcctgatccaggta
tcgcaagcggtcggacagggaaaacattttgattgggcagccaagcaggctggtgtctgg
gataagcgccaaccgctgataaaagccgcgctcaaccgattgaagcccgcacagttacag
cagttgttgcgcaaagccaatggcatcgataaggccattaaaggcatgcgcaacgccgag
ccctgggatgagttactggatttggtattgaatatcgccggtgtgcaaagtttgcatccg
gccaacgaacgactaagcttgaaaatttga
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