Cellvibrio japonicus: CJA_0724
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Entry
CJA_0724 CDS
T00721
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cja
Cellvibrio japonicus
Pathway
cja03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CJA_0724 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cja03021
]
CJA_0724 (rpoA)
03400 DNA repair and recombination proteins [BR:
cja03400
]
CJA_0724 (rpoA)
Enzymes [BR:
cja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CJA_0724 (rpoA)
Transcription machinery [BR:
cja03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CJA_0724 (rpoA)
DNA repair and recombination proteins [BR:
cja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CJA_0724 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF2490
Motif
Other DBs
NCBI-ProteinID:
ACE86234
UniProt:
B3PK62
LinkDB
All DBs
Position
847529..848515
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AA seq
328 aa
AA seq
DB search
MQTAVNEFLTPRHIDVSEITPTRARVVLEPLERGFGHTLGNALRRILLSSMAGCAIVEAE
IDGVLHEYSAIEGVREDVIEILLNLKGVAVVMHGKDSTVLTLSKKGPGVVTAGDIQVDHD
VEIKNPDHVIANITGNTELKMRLTIARGRGYQPADSRRRDDDESRAIGRLQLDASFSPVK
RLAYSVESARVEQRTDLDKLVLDLETNGTIDPEEAIRRAATILQQQLAVFVDLEGEKQSA
PEQKEEAIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLKND
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcagactgcagtaaacgaatttttgaccccacgtcatatcgatgtttcagaaattact
ccaacccgcgcgcgcgtggtgttggagccgctggaacgtggctttggacatacattaggc
aacgccttgcgtcgtattctgctctcttctatggccggttgcgccattgttgaagcggaa
atcgacggtgtattgcacgagtacagcgctattgaaggtgtacgcgaggatgtgattgag
atcctgctgaacctgaaaggtgttgcggtggtaatgcacggtaaggattcaacggttctt
accctgagcaagaaaggtccaggtgttgttaccgctggtgatattcaggtagatcacgac
gttgagatcaaaaatccagatcatgttattgccaacatcactggtaatactgagctgaaa
atgcgtctgacgattgctcgtggtcgcggttaccagccggctgacagtcgtcgtcgcgat
gacgatgaaagtcgtgcaattggtcgtttgcagctggatgcttcgttcagccctgtcaag
cgtttggcttacagtgttgaaagtgcccgtgttgagcagcgtactgacctggataagctg
gttctggatctggaaaccaacggtactattgatccggaagaagctatccgtcgtgctgct
accatcctgcaacagcagttggcagtattcgttgacctggaaggtgagaaacagtctgcg
ccggaacagaaagaagaggcgattgatccgattctgttgcgtccggtggatgatctggag
ctcactgtgcgctcggctaactgcctgaaagcggaaaacatttattacattggcgatctg
atccagcgcacagaagttgagctgttgaagactcctaacctgggtaaaaagtctcttacc
gagattaaagatgtactggcttcacgtggtttgtcgctcggtatgcgtttggaaaactgg
ccgccagccagtttaaagaacgactaa
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