Cellvibrio japonicus: CJA_0969
Help
Entry
CJA_0969 CDS
T00721
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
cja
Cellvibrio japonicus
Pathway
cja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJA_0969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cja03019
]
CJA_0969
Enzymes [BR:
cja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CJA_0969
Messenger RNA biogenesis [BR:
cja03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CJA_0969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Helicase_RecD
AAA_22
TcaA_5th
Motif
Other DBs
NCBI-ProteinID:
ACE84395
UniProt:
B3PLE5
LinkDB
All DBs
Position
1133823..1135142
Genome browser
AA seq
439 aa
AA seq
DB search
MPAAPWDISEFAVEPVDGKTRFHDFDLSPELMHAIADVGFKYCSPIQAQSLPHALQGKDV
VGKAQTGTGKTAAFLAAIIDDLLKNPITEKRYAGEARALVIAPTRELVIQIAEDAKALCK
YTDLKIHTLVGGMDYTKQQRRLHETLVDILVATPGRLLDFCGNKDVYLDQLEVLVIDEAD
RMLDMGFIPQVRQIVRQTPHREDRQTLFFSATFTDDVHNLVQQWTYKPVTIEIEPESVAN
ARVDQHVYLVSTEEKYTLLYNLIQQEHAESMIVFANRRDECRDLYEKLLRHGIKAGLLSG
EITQNKRVSTLDAFKNGDIKVLVATDVAGRGIHISGISHVVNFTLPEEPEDYVHRIGRTG
RAGKSGTSISFACEDDALRLEPIEKLLGKPIKCEQPPEILLLLPPELPALPPRSRHQERY
SNRSVGNRPGGNRSRRPRH
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
gtgccggcagcgccctgggatatcagtgagtttgctgtagagcctgtcgatggcaaaacc
cgcttccatgacttcgacttgtcccccgaattgatgcacgccatcgccgatgtgggattc
aaatattgctcgccaatccaggctcaatccctgccccatgccttgcagggcaaggacgtg
gtcggcaaagcccaaaccggtaccggcaaaacagccgccttcctggccgcgattatcgat
gacctgctgaaaaacccgatcacggaaaaacgctatgccggcgaggcgcgcgcactggtg
attgcgcccacgcgcgaactggtgatccagattgccgaggatgccaaggcactgtgcaaa
tatacagatttgaaaatacacacgctggtgggtggtatggactacaccaagcagcaacgc
cgcctgcatgaaacgctggtggatatcctggtggcgactcccggtcgattgcttgatttc
tgtggcaataaggatgtgtacctggaccagcttgaagtattggttatcgacgaagccgac
cggatgcttgatatgggctttattccccaggtgcgccagatcgtgcgccagacaccgcac
cgggaagatcgccagaccctgtttttctccgctacctttaccgatgatgtgcacaacctg
gtgcaacagtggacctacaagccggttactatcgaaatcgaacccgagtcggtcgccaac
gcgcgtgtggatcaacatgtctatctggtctctaccgaagaaaaatacacactgctctat
aacctgatccagcaggagcatgcggagagcatgattgtgtttgccaatcgccgcgatgaa
tgccgcgatctctacgaaaagttactgcgccatggcatcaaggcgggactgctctctggt
gagattacccagaataagcgggtgtccaccctggatgccttcaagaatggtgatattaag
gtgctggtggccaccgatgtggcgggtcgcggtatccatatcagcggtatcagccacgta
gtgaacttcaccctgccggaagagccggaagattatgtgcaccggatcggccgcactggc
cgtgcgggcaagagtggtacctccatcagctttgcctgcgaagacgatgccctgcgcctg
gagcccatcgaaaaactactgggcaagcccattaaatgtgagcagccgcccgagatccta
ttgctattgccgcctgagctgccggccttgccgccgcgctcgcgccaccaggaacgttac
agcaatcgctcggtgggcaatcgccctggcggcaatcgcagccgccgtccacgtcattaa
DBGET
integrated database retrieval system
