Cellvibrio japonicus: CJA_1127
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Entry
CJA_1127 CDS
T00721
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cja
Cellvibrio japonicus
Pathway
cja03030
DNA replication
cja03430
Mismatch repair
cja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJA_1127 (dnaE)
03430 Mismatch repair
CJA_1127 (dnaE)
03440 Homologous recombination
CJA_1127 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cja03032
]
CJA_1127 (dnaE)
03400 DNA repair and recombination proteins [BR:
cja03400
]
CJA_1127 (dnaE)
Enzymes [BR:
cja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJA_1127 (dnaE)
DNA replication proteins [BR:
cja03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJA_1127 (dnaE)
DNA repair and recombination proteins [BR:
cja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJA_1127 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACE84170
UniProt:
B3PBR3
LinkDB
All DBs
Position
1322930..1326463
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AA seq
1177 aa
AA seq
DB search
MPAANFVHLRLHTEFSLSDSLVRIKPLIKRVAELNMPACAITDQTNFYGLIKFYKAAQGT
GIKPIAGSDFLMASHETDGKPTLLTLLAMNNQGYKNIIELISRAWRSGQQQGIAYIQREW
ISEYSEGVIALSGGKFGDVGMALLGGRQAQAQELLQGWMRDFPNRFYLELQRTGRENDEN
YLHAAVDLAAQMQCPVVATNDVRFLKTSEFEVHEARVCIGEGRTLDDPRRERRYSDQQYL
RSAEEMVELFSDIPEAIANSVEIAKRCTITIQMGKYFLPEYPVPEGLTEAEFFRKISLEG
LDWRLEKILDKSLPDYAERRKVYEERLNFELDIIIQMGFPGYFLIVMDFIQWAKDHDIPV
GPGRGSGAGSLVAYALKITDLDPLQYDLLFERFLNPERVSMPDFDIDFCMDNRDKVIAYV
AENYGRDAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKMIPPTPGMTLAQALEEE
PQLKEFLAQDGDAQEIWEMAVQLEGLTRNVGKHAGGVVIAPTKLTDFAPLFCDETGSGLV
TQFDKGDVEEAGLVKFDFLGLRTLTIIDWARIMIDKQRRKRGESPLDINAIPLDDAKTFG
LLKRAETTAVFQLESRGMKDLIKRLQPDNIEDLIALVALFRPGPLESGMVDDFINRKHGR
AEVAYPDAKFQHASLKPVLEPTYGVIVYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPE
EMAKQRSVFEEGAKKQGVDPDLAIKIFDLVEKFAGYGFNKSHSAAYAIVSYQTAWLKAHY
PAHFMAATMSSDMDKTDKVVTFIEECRTMKLKLLPPDVNSGEFHFTVDDAGRIIYGLGAI
KGLGEGPVESIIAARNDGGPFKDLFDFCARVDARKVNKRALEAIIRSGAADSLGPTYDTP
EYNIDHDRAVMFSAMAEAVKTAEQATANSNAGMMDLFGAVMASEESTNDVYADFRRVRTW
TIKERLHAEKETLGLYLTGHPIDEYESELSHFVSSRIANLKPEKGNQTIAGLIISQRIVK
TKRGDNMAILTLDDRTGRMDITLFAEAYNNARDLLLKDGLLVISGQVRYDDFSGMLKMSA
ETVRLLADVRQEKARELYLHLDSGALPANFARELGELLDPYRQSPQQEARCALVIDYQRS
DARAQLRLGDAWRIRPEDELLQRLRDLYGNKCLNLVY
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgccaattttgttcatttgcgcctacataccgagttttcgctcagcgatagt
ttggtgcgtataaaaccgctgatcaaacgcgtagcggaactcaatatgcccgcctgtgcg
attactgatcaaaccaatttttatgggttaatcaaattttataaagccgcccaggggacg
ggtatcaaacccattgccggcagtgatttcctgatggccagccatgaaacagatggcaaa
ccgacgctgcttaccttgctggcgatgaataatcagggttataaaaatattattgagttg
atttcacgcgcgtggcgttccgggcaacagcagggtattgcctatatacagcgcgaatgg
atcagtgaatacagcgaaggtgtcatagcgctgtccggcggtaagtttggcgatgtgggt
atggcgctactcggagggcgacaggcgcaagcccaggaattattgcagggctggatgcgc
gactttccgaatcgtttttacctggagttgcagcgtaccgggcgtgaaaacgacgaaaac
tatctccatgcagccgttgaccttgccgcacagatgcagtgcccggtggtggcaaccaac
gacgttcgctttttaaaaaccagtgagtttgaagttcacgaggcccgtgtttgcattggt
gaaggccgcacgctggatgatccgcgccgtgagcgacgttacagcgaccagcagtatctg
cgctcggccgaagagatggttgagttattcagtgatattcccgaagcgattgccaacagc
gttgaaattgccaagcgctgtaccatcacgatccaaatgggtaaatactttttgcccgaa
tatcctgttccggaaggtctaaccgaagcggagttttttcgcaaaatttcacttgaaggg
cttgattggcgcctcgaaaaaatcctggataaatcactgccggattacgccgagcgccgc
aaggtttatgaagagcgcttgaacttcgagttggatattattatccagatggggtttccc
ggttacttcctgattgtgatggactttatccagtgggctaaggaccatgatattccggtg
ggaccggggcgcggttccggtgccggctcactggtggcctatgcgctgaaaattaccgat
ctcgaccccctgcaatacgatttgctgttcgaacgtttcctgaaccccgagcgggtttcc
atgcctgactttgatatcgatttctgcatggacaaccgcgacaaggtgattgcctacgtt
gccgaaaactatggtcgcgatgccgttagccagattattaccttcggtaccatggcagcc
aaggcggtggtgcgcgatgtggcgcgcgtgcaaggtaaatcctacggtctggccgacaaa
ctgtccaaaatgatcccgcccacaccgggcatgacgctggcccaggcgttggaggaggag
ccgcaattaaaggaattcctggcgcaggatggcgatgcgcaggaaatctgggaaatggcg
gtgcaattggaagggttgacacgcaacgtcggtaagcatgcggggggggtagtgatcgca
cccactaaactcactgattttgccccgttgttttgcgacgaaaccggcagtggcctggta
acccaatttgataagggggatgtggaagaagcgggactggtgaagtttgacttcctcggg
ttgcgcacgctcaccattatcgattgggcgcgtatcatgatcgataagcagcggcgtaaa
cgcggcgagtcgccactggatattaacgctattcccctcgatgatgccaaaacctttggc
ctgttaaagcgcgcagaaactaccgcggtgttccagttggaatcccgcggtatgaaagat
ctgatcaagcgtttacagccggataacatcgaagacttgatcgccctggtagcgcttttc
cgtcccggcccattggagtcgggcatggtggatgactttatcaaccgcaaacacggtcgc
gccgaagtcgcttatcccgatgcaaaattccagcatgcctcgctcaaacctgtgcttgaa
cctacctatggcgttatcgtctaccaggagcaggtaatgcagatcgcccaggtcctggcc
ggttataccctgggtggtgcggacatgctgcgccgtgctatgggtaaaaagaaaccggag
gaaatggccaaacagcgctcggtgtttgaagagggcgctaaaaagcagggcgttgatccc
gacctggcgatcaagatcttcgacctggtggaaaaatttgccggttacggttttaacaaa
tcccactcggctgcctatgcgatagtctcctaccaaacagcctggctaaaagcacattac
ccggcgcactttatggcggcgaccatgtcgtcggatatggataaaaccgacaaggtggtg
acctttatcgaagagtgtcgcaccatgaaattgaaactcctgccgccggatgtaaattcc
ggggagtttcattttaccgttgatgatgcagggcgcattatttacggtctgggcgcgatt
aaaggtttgggtgaagggccggtagagtcgattatcgcggcgcgcaatgacggtggtccc
tttaaggatttatttgatttttgtgcgcgtgtggatgcgcgcaaagtgaacaagcgcgca
ctcgaagccattatccgctccggtgctgcagatagcctggggccgacctacgatacgccc
gaatacaatattgaccatgatcgtgcggtgatgttctcggcgatggccgaggcggtgaaa
acggctgaacaggcaacggccaacagcaatgccggcatgatggatttgttcggtgctgtg
atggcgtcagaggaatccaccaacgatgtgtacgccgatttccgccgtgtgcgcacctgg
acgatcaaggagcgtttgcatgccgaaaaagaaaccctgggtttatatctgaccggccat
cctatcgatgagtatgaatcggagttgagtcattttgtcagctcgcgtattgccaacctg
aagccggaaaaaggtaaccagaccattgccggtttgatcatttcgcaacggattgtgaaa
accaagcgcggcgacaatatggctatcctgacgttggatgatcgtaccggtcgcatggac
atcaccttgtttgcggaagcttacaataatgcccgcgatttattgttgaaagacggcttg
ctggtcattagtgggcaggtacgttacgacgattttagcggcatgctgaagatgagtgct
gaaactgtgcgcttgctggctgatgtgcgccaggaaaaagcgcgcgaattatacctgcac
ctggattccggagccctgcctgccaatttcgcgcgggaactgggcgagctgctggacccc
tatcgccagtcaccgcaacaggaggcgcgctgtgccctggtaattgactaccaacgcagt
gatgcccgtgcccagttgcgcctgggcgatgcctggcgtattcgcccggaagatgaatta
ctccagcgtttgcgcgacctctatggcaataaatgcctgaatttggtgtattga
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