Cellvibrio japonicus: CJA_1387
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Entry
CJA_1387 CDS
T00721
Name
(GenBank) ATP-dependent RNA helicase, DEAD box family
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
cja
Cellvibrio japonicus
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cja03009
]
CJA_1387
Enzymes [BR:
cja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CJA_1387
Ribosome biogenesis [BR:
cja03009
]
Prokaryotic type
rRNA helicases
CJA_1387
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
UvrD-helicase
AAA_19
ERCC3_RAD25_C
AAA_22
SulA
Motif
Other DBs
NCBI-ProteinID:
ACE83330
UniProt:
B3PD22
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All DBs
Position
1611683..1613164
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AA seq
493 aa
AA seq
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MAAYLRRLRLPFCYLCSQSLPSRGCLMSAFDDLIADTQLRKAIAEQGYEQPTEVQQAAIP
RALEGKNLLVSSKTGSGKTAAFLLPCLQQILAQSAVNPRSTRLLILTPTRELARQIVKNA
QSLLRFTSIKVGSICGGEELRYQKALLRKNPEIVVATPGRLAEHVAHKSTDFSGLEFLVL
DEADRMLDMGLSEDVLKIVESCDAARQTLLFSATLEQKGLRHLIKQVITGEAEEIYIEDS
SNQIEQQMVLADDDKHKERLAVALLNRAEYQKAIVFVNTKVRASQLDNILRYNQLRSTAL
HGDITQDDRKRVLEAFRQGKTRVLVATDVAARGLDIDGVDLVINLEMAHSGDEYLHRVGR
TGRADQPGRAVSFVSASEWNLTKSIERYLKVSLQTIQIPGLEASYKGPDKLKKSGKAYGA
KKKAADGKQDKKKGTTAGGAKKITEKVKVRERERKNIGKRRKPSGIGVDTAVIDGFAPPP
KKVLPRLTPEADE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtatctgcgtagattgcgcctccctttttgctatctctgttcccaatctctg
cccagccgaggatgccttatgtctgcctttgacgatctgattgccgatacccaattgcgt
aaggccattgctgagcaggggtatgagcagcctaccgaggtacaacaggctgctatcccg
cgcgcgctggagggtaaaaacctcctggtcagttcaaagacgggcagtgggaaaacagcg
gcatttttgttgccttgcctgcagcagatactggcccagtcagcggttaatccacgcagc
acacgcttgttaatcctcactccaacccgtgaactggcccggcagattgtcaaaaatgcc
cagagcttgctgcgttttacctccatcaaggtgggcagtatctgtgggggggaagaactc
cggtatcaaaaggcactgctgcgcaagaacccggaaattgtggtggcaacacccggtcgt
cttgccgagcatgtcgcgcacaagtccacggatttttccggccttgagtttttggtactc
gacgaggcagatcgcatgctcgatatgggcttaagcgaggatgtactcaaaattgttgag
agctgtgatgctgcccgccagacattgctcttctctgccaccctggagcaaaaagggctg
cgtcacctgattaaacaggtcatcacgggtgaagcggaagaaatttatattgaggacagc
tccaaccagattgagcaacagatggtgctggccgatgacgacaaacacaaggagaggctg
gcggtcgccttgttaaaccgggcggaataccaaaaagcgattgtctttgtgaacaccaag
gtgcgtgcgtcgcaactggataatattctgcgttacaaccagttgcgttctaccgcactg
catggcgacattacccaggatgatcgcaagcgtgtgctggaagcgttccgccaaggcaaa
acccgcgttctggtggctactgacgtggcggcccgcggcctcgatattgatggtgtggat
ctggtgattaacctggaaatggcccattccggggatgagtatctgcaccgtgtcggacgc
acaggccgtgctgaccagccaggcagggcagtgagttttgtctcggcttccgagtggaac
ctgacgaaaagtattgagcgctatttgaaagtttccctgcagacaatccagatcccgggg
cttgaggccagttataaagggccagacaagctcaagaaatctggcaaggcctatggtgcg
aaaaagaaagcagcggatgggaaacaggataaaaagaaaggtacaactgcaggcggggca
aaaaagataacagaaaaagtgaaagtgcgcgagcgcgagcgcaaaaatattggcaagcgc
cgcaagccaagtgggattggtgttgatactgctgttatagatggctttgcgccaccaccg
aagaaagttctgcctcgcctcacacctgaggcagacgaataa
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