Cellvibrio japonicus: CJA_2438
Help
Entry
CJA_2438 CDS
T00721
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cja
Cellvibrio japonicus
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cja03016
]
CJA_2438 (rnd)
Enzymes [BR:
cja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CJA_2438 (rnd)
Transfer RNA biogenesis [BR:
cja03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CJA_2438 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ACE84912
UniProt:
B3PKH0
LinkDB
All DBs
Position
complement(2784094..2785230)
Genome browser
AA seq
378 aa
AA seq
DB search
MLIPTEPIWIERADQLAELCVGWRQQGAIAVDTEFMRTDTFYPIAGLLQIGDGKGCYLID
PLAIADWQPLRELLLDGKVIKVLHSCSEDLEVFQRWLDLVPSPLFDTQIGAAFANLGFGL
GYANLVKTLLGIEIPKDETRSDWLQRPLSQSQLKYAALDVAHMLVVYGKLLQILKTSQRL
EWVKSDCADLVEQARAPDHFDDAYQKVGFAWKLRPQELAVLRQLCIWRETQARQRDIPRN
RLIKEPSLWDIARKKPRDLQQLQQIADIPQRTLRNDGETLLAITKSQLESEPSTWPERLD
PPLAQSEGPLLKALKQFVRDKADAELIPAEVLIRKKEYEAIVRSGMKGGDYRLPERLKGW
RYTLIGEGLLQVAQDCKL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgctgattcccactgaacctatctggattgagcgcgcagaccagttggctgaactctgt
gtcggctggcgtcaacagggtgccattgcagtcgataccgagtttatgcgcaccgacact
ttttacccgattgcaggcctgttgcaaattggcgatggtaaggggtgttatttgattgac
cccctggctattgccgattggcaacccctgcgcgaattgttactcgatggcaaggtgatc
aaggtattgcattcctgctcggaggatctggaggtgttccagcgctggttggacctggtg
ccgtcgcccttgtttgatacacaaatcggtgccgcctttgccaacctgggatttgggttg
ggatatgccaatctggtgaaaaccctgttgggtatcgagattcccaaagatgaaacccgc
tctgattggttgcagcgcccgctcagccaatcgcaattaaaatatgccgcgctggatgta
gcccatatgctggtggtctacggcaaactgttgcagatcctgaaaaccagccagcgcctg
gagtgggtaaaaagtgattgcgctgatttggttgagcaagcgcgtgccccggatcatttt
gacgatgcctatcaaaaggtcggctttgcctggaagttgcgcccgcaggagctggcagta
ttgcgccagctgtgtatctggcgcgaaacccaggcgcgccagcgcgatattccgcgcaat
cggttgatcaaggagccgagcctgtgggatatagcgcgtaaaaaaccacgcgacctgcag
cagctgcaacagattgccgatattccccagcgcaccctgagaaatgatggtgaaaccctg
ttggccatcaccaaaagccagctcgaatctgaaccttccacctggcctgagcgacttgat
ccacccctggcgcaatccgaggggccgctgctcaaggcgctgaagcaatttgtgcgcgat
aaagccgatgccgagctgattccggcggaagtattgattcgcaaaaaagagtacgaagcc
atagtgcgctccggtatgaaaggcggtgattaccggttgccggagcgactgaaaggctgg
cgctatacgctgatcggtgaaggattattacaggtggcgcaagactgcaaattgtaa
DBGET
integrated database retrieval system
