Cellvibrio japonicus: CJA_2637
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Entry
CJA_2637 CDS
T00721
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
cja
Cellvibrio japonicus
Pathway
cja03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CJA_2637 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cja03400
]
CJA_2637 (sbcB)
Enzymes [BR:
cja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
CJA_2637 (sbcB)
DNA repair and recombination proteins [BR:
cja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CJA_2637 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CJA_2637 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CJA_2637 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ACE84796
UniProt:
B3PLL7
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All DBs
Position
complement(3101512..3103005)
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AA seq
497 aa
AA seq
DB search
MTSTEQITLYWHDYETWGESPAIDRPVQFAGVRTDLDLNILGEPLTIYARPAPDVLPKPE
ACLITGITPQEAEAKGVSEADFIAAIHRELARPGTCGVGYNSIRFDDEVTRYTLYRNFYD
PYEREWRNGNSRWDLIDVLRMTRALRPEGIHWPDYEDGTPCFKLERLTEVNRISHEAAHD
ALSDVHATIAMARLLKSRQPKLYDYAFRLRDKRFAASLIDIDGQKPLLHISSRFPGQQGN
AALVLPLAYHPANKNSVIAFNLAFDPSPLLNLPVDELRIRLFTASADLPEGVERLPLKEI
HLNKTPMLVTTAMVDETLARRLQLDMAICEQHLRAWTQLTRTEREALAEKLDELYSAQDF
TGRTDPEQQLYAGFFSDADKRLMSRVRTLSPDALAKTEWTFEDSRLPELLFRYRARNFPE
SLDPAEQQRWFDFCCGRLTRPDQGASLVLSDFRQRIHALLAGLDVQPPQPDPIKKRQILK
QLQDYADSLEYRYCPQR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgacttctactgagcaaattaccctttattggcacgattatgaaacctggggagagagt
ccggcgatcgatcgccctgtgcaatttgccggtgtgcgtaccgaccttgacctgaatatc
ctgggtgaaccgctgacgatttatgcgcgtccggccccggatgtgcttcccaaaccggaa
gcttgcctgattaccggtatcacccctcaggaggctgaagccaaaggggtcagtgaggct
gactttattgcagcgatccaccgtgaactggcgcgacccggaacctgtggcgtggggtat
aactccattcgctttgatgatgaggtgacccgctataccctctaccgcaatttctatgat
ccctatgagcgcgaatggcgcaatggcaactcgcgctgggatttgattgatgtactgcgc
atgacgcgcgcattgcgcccggagggaatccactggcccgattacgaggacggcacaccc
tgctttaagctggagaggctcaccgaggtcaaccggatcagccatgaagcggcccacgat
gcactatcggatgtgcatgccaccattgccatggcccgcctgcttaagtcacgccagccc
aagctgtatgattatgcctttcgcttgcgcgacaaacgctttgcagccagtttgatcgat
atcgacgggcaaaagcctttgttacatatttcatcgcgctttcctggccagcagggcaat
gctgccctggtgctgcccctggcttaccatccggcaaacaaaaattcagtgattgccttt
aacctggcgttcgatccctcaccgctgttgaatttaccggtagatgaattgcgcattcgc
ctgtttactgccagtgctgatttacctgagggggttgaacgtttacctctgaaggagatt
catcttaataaaaccccgatgctggttaccactgctatggttgatgagaccttggcgcgt
cgcctgcaattggatatggcgatttgtgagcaacacttgcgtgcgtggacccaattgacc
cgtaccgagcgtgaagctctggctgaaaagttggatgaactgtacagcgcccaggatttc
accgggcgcacagaccctgagcaacagctctatgccggctttttcagcgatgctgacaag
cgcctgatgagccgtgtgcgaaccttatctcccgacgccctggccaaaacggagtggacc
ttcgaggatagccgccttccggagctgctgtttcgctatcgcgcccgcaatttccccgag
agccttgacccggcggagcagcagcgctggttcgatttctgttgtggccggcttacccgt
cctgatcagggcgccagcttggtattgagtgactttcgccagcgtatccacgccctgttg
gcaggattggatgtacaacccccccagcctgatcccatcaaaaaacggcagatccttaag
caattgcaggattatgccgatagccttgaataccgctattgcccgcagcggtga
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