Cellvibrio japonicus: CJA_3117
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Entry
CJA_3117 CDS
T00721
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cja
Cellvibrio japonicus
Pathway
cja03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CJA_3117 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cja03019
]
CJA_3117 (orn)
03009 Ribosome biogenesis [BR:
cja03009
]
CJA_3117 (orn)
Messenger RNA biogenesis [BR:
cja03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CJA_3117 (orn)
Ribosome biogenesis [BR:
cja03009
]
Eukaryotic type
Pre-60S particles
RNases
CJA_3117 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Ribosomal_L10
Motif
Other DBs
NCBI-ProteinID:
ACE84643
UniProt:
B3PDR4
LinkDB
All DBs
Position
complement(3701677..3702234)
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AA seq
185 aa
AA seq
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MTTSAPNENNLIWIDLEMTGLDPDKDVIIEIATIVTDAHLNILAEGPVFAIHQPDSIMLN
MDEWNTNQHGKSGLTQRVRDSQVSIEQAEAATIAFLEQWVPKGKSPICGNSICQDRRFLV
RGMPRLENYFHYRNLDVSTVKELARRWRPDVMAGVKKSGAHLALDDIRDSIDELKHYRAT
FFKMD
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaagcgccccgaatgagaacaacctgatctggatcgacctggaaatgaccggc
ctggacccggataaggatgtgatcatcgaaatagccaccattgtcactgacgcccacctc
aacatcctcgccgaaggccccgtattcgccatccaccaacccgacagcatcatgctcaat
atggatgagtggaacaccaaccagcacggcaaatccggcctcacccagcgcgtgcgcgat
agccaggtcagtatcgaacaggccgaggccgcgaccattgccttcctggagcaatgggta
cccaagggcaaaagccccatttgtgggaattccatctgccaggaccgccgctttttagtg
cgcggtatgcccaggctggaaaactacttccactatcgcaacctggatgtcagtacggta
aaagagcttgcgcgccgctggcggccggatgtgatggccggcgtgaaaaaatccggtgcg
catttggcgctggatgatattcgcgattcgattgacgagttgaagcattatcgggcgact
ttcttcaagatggattaa
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