Cellvibrio japonicus: CJA_3478
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Entry
CJA_3478 CDS
T00721
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cja
Cellvibrio japonicus
Pathway
cja03030
DNA replication
cja03410
Base excision repair
cja03420
Nucleotide excision repair
cja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJA_3478
03410 Base excision repair
CJA_3478
03420 Nucleotide excision repair
CJA_3478
03440 Homologous recombination
CJA_3478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cja03032
]
CJA_3478
03400 DNA repair and recombination proteins [BR:
cja03400
]
CJA_3478
Enzymes [BR:
cja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJA_3478
DNA replication proteins [BR:
cja03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CJA_3478
DNA repair and recombination proteins [BR:
cja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CJA_3478
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJA_3478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
HHH_5
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ACE84986
UniProt:
B3PG24
LinkDB
All DBs
Position
complement(4171849..4174662)
Genome browser
AA seq
937 aa
AA seq
DB search
MYPSAFVWAFGPVNYRIYAMTQQTLLSVSSPLVLVDGSSYLYRAYHALPPLTNSKGQPTG
AVKGVVNMLRRLRKDYPQSPIAVVFDAKGKTFRDELFAEYKANRPPMPEDLRPQVQPIHD
IVQAMGLPLLVIEGVEADDVIGTLARQATEQKRDVIISTGDKDMAQLVNEHVTLVNTMTD
SVLDIPGVHAKYGFGPELMIDYLALMGDKVDNIPGVPGVGEKTAQGLIQGIGSLDAIYTD
LEKVRSLSFRGAKTMPEKLIEHRDMAYLSYQLATIKTDVELPMGPEALHNQAADNAKLRV
LFEEMEFKSWIAELSNTESAIEIDSQVDVPTKTAIEKHYDIIFTESEFATWLARLQAATE
FSFDTETTSLDVMEARIVGVSVATEPGVAAYIPCGHDYMGAPEQLSLEWVLNQLKPLLED
EHKIKIGQNIKYDRSVLLNYGITLRGIKYDTMLESYVWNSVASRHNMDDLAQTYLDYKTV
TFEELAGKGVKQLTFNQLKIEDAGHYAAEDADITLRLHQFFWPQLQQQSGLCKVFREIEM
PLVPVLSHIERNGALVDAKLLGQHSIELGERMVQLERKAYELAGQEFNLSSPKQLGVILF
EQLQLPVIKKTPTGTPSTAEEVLQELALDYPLPKVIMEYRAMAKLKSTYTDKLPLMINPA
TGRIHTNYHQAVAATGRLSSQDPNLQNIPIKTDEGRRIRQAFIAPAGYKLVAADYSQIEL
RIMAHLSSDSGLLSAFEKGLDVHRATAAEVFGVALDSVTPEMRRSAKAINFGLIYGMSAF
GLAKQLHVGRNEAQQYIDRYFERYPGVQRYMNNIRAQAHEQGYVETLFGRRLYLPDINAK
NKNFQLAAERTAINAPMQGTAADIIKTAMIAVDNWLVEAGLDAKLIMQVHDELVLEVAES
CLDEVCTGVVARMSAAARLNVPLIVDAGVGNNWDEAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
gtgtatccttcggcctttgtttgggcctttgggccagttaattaccggatttacgccatg
acacaacagacgctcctttccgtttcctctcccctggttttggtcgatggttcttcttat
ctctatcgtgcataccatgcccttcctcccctgacgaactccaaaggccagccgacaggt
gccgtaaagggtgtggtcaatatgttgcggcgcttgcgtaaggattacccgcaaagccct
attgcggtggtatttgatgcaaaggggaaaacgtttcgcgatgaactctttgccgaatac
aaggccaatcgtccaccaatgcccgaggatttgcgtccccaggtgcagccgattcacgac
atagtacaagccatggggttgccgttgttggtgattgaaggggttgaggctgatgatgta
attggcacccttgcccgtcaggcaacagagcaaaagcgtgacgtgatcatttccacgggt
gataaggatatggcgcaattggtgaacgagcatgtgacgctggtgaataccatgacggat
tctgtgctggatattcccggtgtgcatgccaaatacggttttggccccgaattgatgatt
gattatctcgccctcatgggtgacaaggtcgataacatccccggtgttccgggcgttggc
gaaaaaaccgcacaaggattgatacagggaattggcagcctcgatgcgatttataccgat
ttggaaaaagtgcgcagcttgtctttccgcggcgcgaaaaccatgccggaaaaactgatc
gaacatcgcgatatggcctatctttcctaccagctggccacgatcaagacggatgtggaa
ttacccatggggccggaagcattgcacaaccaggccgccgacaatgcaaaattgcgtgtg
ctgtttgaggagatggaattcaaaagctggattgcggagttgtcaaatacagaatctgct
attgaaattgattcgcaggtagatgtgccgacgaaaaccgcgattgaaaaacattacgat
attatttttacagaatcggaatttgcaacctggctggcgcgtttgcaagccgcgacagag
ttttcatttgatacagaaacgaccagtcttgatgttatggaagcgcgtattgtcggtgtc
agtgtggcaacagaaccgggtgttgctgcttatatcccctgtggtcatgattatatgggt
gcgccggagcaactgtccctggaatgggtgttgaaccaactcaagccgctgcttgaagat
gaacataaaatcaaaattggccaaaatattaaatacgatcgcagtgtattgctgaattac
ggtatcaccttgcgcggtattaaatatgacaccatgctggaatcctacgtgtggaattca
gtggctagccgccacaacatggatgatctcgctcagacctatctcgattataaaaccgtt
acgtttgaagagttggcaggcaaaggcgtcaagcaactcacatttaatcaattaaaaatt
gaagatgcaggacactatgcagcagaggatgccgatatcacgctgcgcctgcatcagttc
ttttggccacaactgcaacagcaatcgggtttatgcaaggtgtttcgtgaaattgaaatg
cctttagttccggtgctatcacacattgagcgcaatggtgctttagtcgatgcaaaattg
cttggtcagcacagtattgaattgggcgagcgcatggtacagcttgagcgtaaagcctat
gaactggccgggcaggaatttaacctgagctcacccaaacaattgggggtgattttattt
gagcaattgcaattgccggttatcaagaaaacaccgacagggacaccgtcgacggcagaa
gaagtgctgcaagaattagcactggattatccgctgcctaaagtgattatggagtatcgc
gcaatggcgaaactcaaatcgacttatacggataaactgccgttgatgattaatcctgcc
accggccgtatccataccaattatcaccaggcggtagcggcgaccggtcgtctgtcatcg
caagatcctaatctgcaaaatattcccataaaaaccgatgaagggcgtcgtattcgccag
gcctttattgcgcctgccggatataaattggttgctgcagattattcacaaattgaattg
cgcatcatggcgcatttatcgagtgattctggtttgttgagcgcctttgaaaaagggctg
gatgtgcaccgggctactgccgcagaagtctttggagtagcgctggattcagtaacccct
gaaatgcgtcgtagtgccaaagcgattaactttggtttgatttacggcatgtctgcattt
ggtttggccaaacaactgcatgttggacgcaacgaagcgcaacagtacatcgaccgttat
ttcgagcgctatcccggtgtgcagcgctatatgaataatatccgtgcccaagcccatgag
caggggtatgtggagaccctgttcgggcgccggctctatctgccggatatcaatgccaaa
aacaaaaactttcagttggctgcggagcgcacggcgattaacgcacccatgcagggcacg
gccgctgacattatcaaaacggccatgattgccgtggataactggttggtagaggccggg
ctggatgcaaaactcattatgcaggtgcatgacgagctggtgttggaagtcgcggaatcc
tgcctggatgaggtttgcacaggtgtggttgccaggatgtctgccgcggccaggctaaat
gtccccctgattgttgatgccggtgtggggaataactgggatgaggcacactaa
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