Cellvibrio japonicus: CJA_3566
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Entry
CJA_3566 CDS
T00721
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cja
Cellvibrio japonicus
Pathway
cja03420
Nucleotide excision repair
cja03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CJA_3566 (uvrD)
03430 Mismatch repair
CJA_3566 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cja03400
]
CJA_3566 (uvrD)
Enzymes [BR:
cja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CJA_3566 (uvrD)
DNA repair and recombination proteins [BR:
cja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJA_3566 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CJA_3566 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Peptidase_M13_N
Motif
Other DBs
NCBI-ProteinID:
ACE83894
UniProt:
B3PGX1
LinkDB
All DBs
Position
4259311..4261620
Genome browser
AA seq
769 aa
AA seq
DB search
MAICISAQYNFTPRPFRPSPRDLIPVAFMDVSHLLDNLNDAQREAVSAPAGNQLILAGAG
SGKTRVLVHRIAWLIQVEQVSPYSIMAVTFTNKAAREMRARLDELFGQSLTDSGSQHINS
RAMWVGTFHGLAHRLLKAHWQDAGLPQNFQILDSDDQLRMIKRVYQQLNLDDSKWPHRQA
IWYINGQKDEGLRPQHIEETADPFVRTMLSIYRAYEEDCARAGVVDFAELLLRAHELWLN
KPHILEHYRQRFPFILVDEFQDTNSVQYAWLRVLAGKESVVTAVGDDDQSIYGWRGAKIE
NIRQFSEDFPNTQLIRLEQNYRSTGNILHAANAVIAHNYGRLGKDLWTQGAKGEPISLYA
AFNEQDEARFIVERIQSWVKQGKAKNTCAILYRSNAQSRVLEEALLREAIPYRIYGGQRF
YDRLEIKNAIAYMRLISNRHDDAAFERVINTPTRGIGGKTVDDIRLFAREQGCSLWQACE
QIIAQKALSARAANAVQTFLALVQQLARAANDINIHGDTPSLDEIARLVIEDTGLLDFHQ
SEKGEKGQARGENLQELINACRAFDAEDAEEGVTPLQQFLDTAALDAGETQADEFEDAVQ
LMTLHSAKGLEFPLVFLAGVEEGLFPHKMSADDPDRLEEERRLAYVGITRAMEKLIITYA
ETRRMYGSETFNSVSRFVKEIPADCIEEVRLKTAVTRPVSFQRTAAREALVDTGSDTGFK
LGQRVSHPIFGEGVILQFEGSGPNAVIQVKFEKIGSKRLVMQYAKLQAI
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
gtggctatatgtatatctgcccagtacaatttcacgcccaggcccttccggccatcgccc
agagatttgataccggtagcttttatggatgtgtcccacctgctcgataaccttaatgac
gcccagcgcgaagcagttagcgccccggccggcaaccagttgatcctggccggtgccggc
agcggtaaaacccgggtgctggtacatcgtattgcctggctgatccaggtggagcaggta
tcgccctattcgattatggcggtcacctttaccaataaagccgcgcgcgaaatgcgcgcg
cggctcgacgagctgtttggccagtccctcaccgacagcggcagccagcacatcaacagc
cgcgccatgtgggtaggcaccttccacggcctggcgcaccgcctgctcaaggcccactgg
caggacgccggcctgccgcaaaatttccagatcctcgacagcgacgaccagctgcgcatg
atcaaacgcgtgtaccagcagctcaacctggacgacagcaaatggccacatcgccaggcc
atctggtacatcaatggccaaaaagacgaaggcttacgcccacagcatatcgaagaaacc
gccgatccctttgtgcgcaccatgctcagtatctatcgcgcctacgaggaagactgcgcg
cgcgccggggtggtggactttgccgaattattgctgcgcgcccacgaactctggctcaac
aagccccatatcctcgaacactatcgccagcgcttcccgtttattctggtggacgaattc
caggacaccaacagtgtgcaatacgcctggttgcgtgttcttgccggcaaggaaagtgtt
gtcaccgctgtgggtgacgacgaccagtccatctatggctggcgcggtgccaagatcgaa
aatatccgccagttcagcgaggatttccccaacacccagttgattcgcctggagcaaaat
tatcgctccaccggcaatatcctccatgccgccaatgccgtcattgcgcacaattacggg
cgcctgggcaaggatttatggacgcaaggtgccaaaggcgagcctatttccctctatgcc
gccttcaacgagcaggatgaagcgcgctttatcgtggagcgcatccaaagctgggtgaaa
cagggcaaggctaaaaatacctgtgcgattctctatcgctccaacgcccagtcgcgggtg
ctggaagaggccctgctgcgcgaagctatcccctatcgcatctatggcggtcagcgcttc
tatgatcgcctcgaaatcaaaaacgccatcgcctatatgcgcctgatcagcaaccgccac
gacgacgcggcgtttgagcgggtaatcaatacacccacccgcggcatcggcggcaaaacg
gttgatgatatccgcctgtttgcgcgcgagcagggctgttcactctggcaggcctgcgaa
caaattatcgcgcaaaaggcactgtcagcccgcgccgccaatgccgtacaaaccttcctt
gccctggtccagcaactggcccgcgccgccaacgacatcaatatccatggcgatacaccg
tcacttgatgagatcgcacgcctggtcattgaagataccgggctactggacttccaccaa
agtgaaaagggtgagaaaggccaggcgcgcggcgaaaacctgcaggaattaatcaacgcc
tgccgcgcctttgatgcggaagatgccgaagagggtgtcacgccgctgcaacagttcctc
gataccgccgcacttgacgcaggtgaaacccaggccgatgaatttgaagatgcggtgcaa
ctgatgaccctccactccgccaaggggctggaatttccgctggtcttcctggccggtgtc
gaagagggattattcccccataaaatgtccgccgacgaccccgaccgcctcgaagaagag
cgccgcctggcctatgtgggtatcacccgcgcgatggaaaaactcatcattacctatgcc
gaaacccggcgcatgtacggcagtgaaacctttaacagcgtttcgcgctttgtgaaggaa
atccccgccgactgcatcgaggaagtccgcctcaaaaccgccgttacccgcccggtcagt
ttccagcgcacagcagcgcgtgaagccctggtagataccggcagtgacaccggctttaaa
cttggccagcgcgtcagccatcccatctttggcgaaggcgttatcctgcaatttgaaggc
tcaggccccaatgcggtgatccaggtaaaatttgaaaagatcggcagcaagcgtctggtg
atgcaatacgcgaagttgcaggcgatttga
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