Caldichromatium japonicum: GWK36_00260
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Entry
GWK36_00260 CDS
T07151
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cjap
Caldichromatium japonicum
Pathway
cjap03420
Nucleotide excision repair
cjap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cjap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GWK36_00260 (uvrD)
03430 Mismatch repair
GWK36_00260 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjap03400
]
GWK36_00260 (uvrD)
Enzymes [BR:
cjap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GWK36_00260 (uvrD)
DNA repair and recombination proteins [BR:
cjap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GWK36_00260 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GWK36_00260 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_11
AAA_22
GPAT_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
QIK36690
UniProt:
A0A6G7V9V6
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All DBs
Position
complement(54727..56901)
Genome browser
AA seq
724 aa
AA seq
DB search
MTPMNNIQSFDLLNPAQREAVASRSSHILVLAGAGSGKTRVLTQRIAWLIQQGTPSWSIL
AVTFTNKAAREMRARLDNLLDTALSGAWIGTFHGLAHRFLRAHWQEAGLPQHFQILDSDE
QLRLIKRLLKEMQLDESRWPPGQIQAFINRQKDEGRRPQHLVARGDFIQDRFIELYQNYE
TARIKSGMVDFADLLLYTLELLRERRDLLEHYRQRFNHLLVDEFQDTNAIQYAWLRLLAG
EENHLFVVGDDDQSIYGWRGAQIENIQSFQRDYPRARLIRLEQNYRSTGNILNAANVLIA
HNAGRLGKTLWTQGEAGAPIRLYTAFNEIDEAQFVAERIQWFYAQGYAYIDCAILYRTTA
QSRPLEEALIQTGIPYRVYGGLRFFERAEIRDAMAYLRLIANPDDDQAFDRIVNRPPRGI
GQRTLELIREATRPDGLSLWRAARKLINSGALGARAVQTLQGFFTTIEGQRRALTERTLA
EICRYAIEGTGLMEHFRENKDGRGQDRIENLEQLIETAQRFEQEQPGPQPQLLNDFLAHA
ALESGEAEAEPFTDSVQLMTLHSAKGLEFPVVFLVGLEEGLFPHSLSLDDPKRLEEERRL
CYVGITRAMRELYLTHAESRRLHGREEYPLPSRFLYELPMEMIEEVRRELIRRPVRGQSP
SARMEGPFRPGQWVRHPKFGDGVVLTSEGFGPDTRLHIDFKGGVGIKCLVLAYAGLTPSV
CSPR
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgacacccatgaacaacatccagtcgtttgacctactcaatccagcccagcgcgaggcg
gtcgccagccgatcgagtcacatactggtccttgcaggtgcaggttcaggcaagaccagg
gttctgacccaacggattgcatggttgatccaacagggaaccccttcctggtcaatcctt
gcggtgacctttaccaacaaggcagcgcgcgagatgcgagcaaggctcgacaacctgttg
gatactgcgctcagcggggcctggatcgggacctttcacgggcttgcacatcgtttctta
cgtgcccattggcaagaggcagggctgccccagcatttccagatcctggacagcgatgag
caactgcgtttgatcaagcgcttgctcaaggagatgcagctcgatgagtcgcgctggccg
cctggccagatccaggcgtttatcaatcggcaaaaggacgagggacgaaggccacaacac
ctcgtcgcccgcggggacttcatccaagacaggttcatcgagctctaccagaactatgaa
acggcgcggatcaaatctgggatggtggactttgccgacctgctgctttatacgctcgag
cttctacgcgagcgccgagatctacttgagcactaccggcagcgcttcaatcatctcctg
gtcgatgagtttcaggacaccaatgccatccaatacgcctggctgaggctgcttgccggc
gaagagaatcatctcttcgttgtcggcgacgacgatcagtcgatctatggttggcgcggg
gcgcagatcgagaatatccaatccttccagcgggactatccaagggcgcgcctgatccga
ctcgagcaaaactatcgctcgaccggcaatatcctgaatgcggccaatgtcctgatcgcc
cacaatgccggacggctcggcaagacactctggacccagggcgaagcaggtgccccaatc
cggctctataccgccttcaatgagatcgacgaagcccaattcgttgccgagcgtatccag
tggttctacgcccaaggttacgcctacatcgactgcgccatcctttaccgaaccactgcc
caatcgcgaccgttagaagaggcgctcatccagaccggcatcccctatcgggtctatggc
gggctaaggttcttcgagcgcgccgagatccgcgatgccatggcctatcttcgcctgatc
gccaacccggatgatgatcaggcattcgaccggatcgtcaatcgcccaccacgcgggatc
ggtcagcgcacgctcgagctcatccgtgaagcgacgcgtcccgatggtctctcactctgg
cgagcggcccgcaagctcatcaacagcggtgcactcggggcacgtgcagtacagacctta
cagggattttttacaacgatagaggggcaaaggagggccttgacagaacgcacgctcgcc
gagatatgccgctatgccatcgagggcaccggtctgatggagcacttcagggaaaacaaa
gacggacgagggcaagaccggatcgaaaacctagagcaactcatcgagaccgcccagcgt
tttgagcaggaacagccaggcccccaaccccagctcctcaatgatttcctggctcatgcc
gcccttgagtccggcgaggccgaggccgaacccttcaccgacagcgtccagctcatgacc
ctgcatagcgccaaggggctcgagtttcccgtggtctttctggtaggcctagaggagggg
ctctttccccatagcctctcgctcgatgaccccaaacgtctcgaagaggaaagacggctg
tgctacgtcgggatcacccgcgccatgcgcgagctctatctcacccatgccgagagccgc
aggctgcatggacgcgaggaatatcccctaccctcgcggtttttatatgagctacccatg
gaaatgatcgaggaggttcgccgcgaactaatccggcgcccagttcgcgggcagtctccc
tccgcccggatggaaggcccctttcgtcctggccagtgggtgcgccatcccaaattcggc
gacggggtggtgctaaccagcgagggatttggacctgatacaaggctacatatcgacttc
aagggcggcgtagggatcaaatgcctggtcctggcctatgccggtctgaccccaagcgtc
tgttcccctagatga
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