Caldichromatium japonicum: GWK36_02155
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Entry
GWK36_02155 CDS
T07151
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
cjap
Caldichromatium japonicum
Brite
KEGG Orthology (KO) [BR:
cjap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjap03021
]
GWK36_02155 (rapA)
Transcription machinery [BR:
cjap03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GWK36_02155 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
Tudor_RapA
SNF2-rel_dom
ResIII
DEAD
AAA_22
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QIK36997
UniProt:
A0A6G7VB29
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All DBs
Position
448413..451187
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AA seq
924 aa
AA seq
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MPAFVIGQRWLSETQHELGLGIVEAVEGRHVRIRYPATGETRLYAQAEAPLARLVIRLGE
RVRDRSGRELRVIEMHERRGLLVYRGEDDSGRLHELPESELDDRLLYNRPAQRLLAARFD
PDIWFGLRYRSWLQGMREAGSPTLGLVGPRIALIPHQLHIAAEVSKREAPRVLLADEVGL
GKTIEAGLILHRMRLIGSARRVLILTPEPLVNQWLVEMLRRFNLSFALFDEELIESMEEG
NPFLTEQRVLCSLSLLLSHRRARLRALESPWDLLILDEAHHLTWSEDNPSPAYRLVEALA
QRAPSVLLLTATPEQLGREGHFGRLRLLDPARFVDLASFHEQERHYAEIAALAERLLDPV
PLSGAEQERLEALLGPCRDLDRETLIERLIDHHGTGRILFRNTRAAILGFPHRVLKADPL
PEPEAYRALALSDRLTPEHAYGSGWESFDPRVEWLIQTLRALRPDKVLLICAHARTVLEL
REALRQRAGIHAAVFHEGMEIVERDRAAAYFAAAEEGTQILLCSEIGSEGRNFQFVQHLI
LFDLPLDPDLLEQRIGRLDRIGQGPVIYLHVPYLAGGPMEVMLRWYQEGLGIFAHPCPAG
PEIYERQAQALLETLANPEQAESLIAETRKLAERLNAELAAGRDRLLDLHSHRLARDTAL
VEAIRAADADPTLAEYLTDLWDAFGVEHEPGPEGSVVLRPGAHMFQEQFPYLPEDGLTAT
FDRTQALAHEDYAFLTWEHSMVRAAREWLTASQLGTTALILVRDRRFARGTFLLEMLYLA
ECPAPLELHVDHFLPPTLLRFLLDAEGHDRSAEIHWDSLAGDCLAQNARLGCLVIESQAE
QLAQLIERGESLAQGALPDLIQAARAQMEQVLGDEIERLEALAQVNPLVRPDEIARLADR
RARLAEQISKTYLRLDALRLIVAY
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctttcgtcattggtcagcgttggttgagcgagacccaacacgagcttgggctc
gggatcgtcgaggcggtcgaggggcgccatgtgcggattcgctatccagcgaccggtgaa
accaggctctatgcccaggcggaggcacccttggcgcgcctggtcatcaggctaggcgag
cgggtccgcgatcgcagcgggcgcgaattgcgggtcatcgagatgcacgagcggcggggt
ctgctcgtctatcgcggcgaggatgactctggtcggctccatgagcttcctgagtccgag
cttgacgatcgtctgctctacaatcgcccggcgcagcgcctgcttgcagcccgttttgat
ccagacatctggtttggcctgcgttaccgaagctggttacaggggatgcgtgaggccggc
tctccgaccctaggcctggtggggccgaggatcgcactcatcccgcatcagcttcatatc
gccgccgaggtctccaaacgcgaggccccgcgtgtgctcctggccgatgaggtgggcctg
gggaagacgatcgaggcaggactgatcctgcatcggatgcgtctgatcggcagcgcccgc
cgcgtcctcattttgacccctgagccgctagtcaatcagtggctggtcgagatgctgcgg
cgcttcaatctgagttttgccctattcgatgaagagctaatcgagtcgatggaggagggc
aatccattcctgaccgagcagcgggtactctgtagcctgtcactattgctgagccatcgc
cgcgcacgcctgcgggccctcgagtccccctgggacctcttgatcctggacgaggcgcat
catctgacctggtccgaggacaaccccagccctgcctatcgcttggtcgaggccctggcc
cagcgcgccccctcggtgttgctcttgaccgccaccccggagcaattggggcgcgagggc
catttcgggcggctacgtctcttggacccagcgcgttttgtcgacctcgcgagcttccac
gagcaggaacgccattatgccgagatcgcggccctagccgagcgcctgctcgatcccgtg
ccactcagcggcgcagaacaagagcggctggaggcgctgctcggcccctgccgcgacctc
gatcgcgagaccctgattgagcgcctgatcgaccaccacggcaccgggcgcatcctgttt
cgcaatacccgcgccgccatcctaggctttccacatcgtgtgctcaaggccgatccatta
cccgaacccgaggcctaccgggcgcttgccctcagcgatcgcctgacccctgagcatgcc
tatggttcaggctgggagtcatttgatccaagggtcgaatggttgatccaaaccctgcgc
gccctgcgtccggacaaggtgttgctgatctgtgcccatgcgcgcacggtgcttgagctg
cgcgaggcgctgcgtcaacgcgccggcatccatgccgcggtctttcacgaagggatggag
atcgtcgagcgcgatcgcgccgcggcctattttgccgctgccgaggaggggacccagatc
ctgctctgctcagagatcggcagcgaggggcgcaacttccagttcgtccaacacctgatc
ctcttcgatctgcccttggatcccgatctactcgaacagcgcatcggacggctagatcgc
atcggtcaggggccggtgatctatctgcatgtcccctatcttgctggcgggccgatggag
gtgatgttgcgctggtatcaggagggcctggggatcttcgcgcacccctgccccgcaggg
ccggagatctatgaacgtcaggcacaggccctattagagacactggccaatcccgaacag
gcggaatcgctcattgccgaaacccgcaagcttgccgaacggctcaatgcggagcttgcc
gccgggcgcgatcggttgttggatcttcattcccatcggctggcgcgcgataccgccctg
gtcgaggcgatccgcgccgccgatgccgacccgacgcttgccgaatatctcactgacctt
tgggacgccttcggggtcgaacatgagcctgggcctgagggctcagtcgtgctgcggccg
ggcgcacacatgttccaagagcagttcccctatctgccggaagacggactgaccgcgacc
ttcgaccgcacccaggcactcgcccatgaggactatgcctttttgacctgggagcactcc
atggtccgtgccgcgcgcgagtggctgaccgcctcccaactcggcaccactgccctgatc
ttggtgcgcgataggcgttttgcgcgggggacgtttctccttgagatgctctatctcgcc
gaatgtcccgccccactcgagcttcatgtcgatcatttcctgccgccgactttgctgagg
ttcttgctcgatgccgagggtcatgaccgtagcgctgagatccactgggacagcctagcg
ggcgactgtcttgcccaaaatgcacgtcttggctgtttggtgatcgaatcccaggccgag
caactggcccagctaatcgaacgtggagagtcgcttgcacaaggggcgcttcccgatctg
atccaagcggcgcgggcgcagatggagcaggtcttaggcgatgagatcgagcggctcgag
gccctggcgcaggtcaatcccctggtgcggcccgacgagatcgcccgcctcgccgaccgg
cgcgcgcgccttgccgaacagatcagcaagacctatctgcgactcgatgccctgcgcctc
atcgtcgcctattga
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