Caldichromatium japonicum: GWK36_02730
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Entry
GWK36_02730 CDS
T07151
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cjap
Caldichromatium japonicum
Pathway
cjap03030
DNA replication
cjap03430
Mismatch repair
cjap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cjap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GWK36_02730 (dnaE)
03430 Mismatch repair
GWK36_02730 (dnaE)
03440 Homologous recombination
GWK36_02730 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjap03032
]
GWK36_02730 (dnaE)
03400 DNA repair and recombination proteins [BR:
cjap03400
]
GWK36_02730 (dnaE)
Enzymes [BR:
cjap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GWK36_02730 (dnaE)
DNA replication proteins [BR:
cjap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GWK36_02730 (dnaE)
DNA repair and recombination proteins [BR:
cjap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GWK36_02730 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QIK37096
UniProt:
A0A6G7VB50
LinkDB
All DBs
Position
complement(552286..555855)
Genome browser
AA seq
1189 aa
AA seq
DB search
MDSRFIHLHLHSEYSLVDGLIQLKPLVNAVAKAGMPAVALTDQGNLFGLVRFYKAAVTAG
IKPIAGADLWIRHPEDPTKPHRLVLLIQDQRGYRNLIELVSRSFLKGQEAGFPQVDPAWI
KGHHQGLIALAGPGSDLAEALVKGRTKEAERVLDRWLKVFGDRYYLELVRTGRGREGHWI
EACVDLALRRGVPVVATNDVRFLSPDDFEAHEVRVCIHQGRMLDDPDRPRLYSEEQYLRT
PAEMSELFADLPEALVNAVEIAKRCNLELKLGKPHLPIFPVPAGMTTESFFAEECRRGLN
ERLSHILDPADPDSAERRRLYEERLESELAVITQMGFAGYFLIVADFIRWAKENGIPVGP
GRGSGAGSLAAYAIRITDLDPIAHNLLFERFLNPERVSMPDFDIDFCMEGRDRVIEYVAQ
KYGREAVSQIITFGTMAAKAVVRDVGRVMGYPYGFVDKIAKMVPFEPGMTLDKALAESED
LRRVYQDDEEVRALIDMARKLEGLTRNAGKHAGGVVIAPGKLTDFTPLYCEPGGEDPVTQ
YDKDDVEQVGLVKFDFLGLRTLTIIDWALKTINAQRAARGESLIDLERIDPHDPDAFAML
KRCETTAVFQLESRGMRELIKKLQPDCFDDITALVALFRPGPLQSGMVDDFIERKHGRAP
ILYLHPHLEPILKPTYGIILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEEMAKQRA
TFESGAEARGVDRQLAAQIFDLMEYFSGYGFNKSHSAAYALVSYQTLWLKAHYPAAFMSA
VLSADMDNTDKVVTLIDECRSLGLRIEPPAINHSDYRFSIAREKAILYGLGAIKGVGASA
IEAILQARAQGPFRDLWDLCMRVDLQRVNRRVLESLIRAGALDALGPNRATLMGHLPLAL
RAAEQYRERRAAGQVDLFGASGSSDPPRPDPQTAGESLPDWEDEERLRGEKETLGLYLTG
HPLARYEDELRSMGCIRIARLLETDRELGRRERELYHLVGLVVNVRHSKGSRGRLGSMVL
DDRTGRIEVTVFSELYEQVRPLLAIDQILSVRGTLSFDDFRDTWSLRADSVRLFEEARAA
SAHHLFLLLDLSDPAAHAQGLERVRALRELLADYRETDPQRSLPIRLLYRCPGAQGELML
GRAWRVRPADALLKELRQLLGPTGVSVSYERLPQSLPGPEALPRLSAVS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
gtggacagccgttttatccatttgcatctacattccgaatactccctggtcgatggtctg
atccagctcaaacccctggtcaatgcagtcgccaaggctggaatgcctgccgttgccctt
accgatcaaggcaatctctttggcctggtgcgtttttacaaggcggcggttaccgccggt
atcaaaccgatcgccggtgccgatctgtggatacgccatcccgaggaccctaccaaaccg
catcgcctggtcctgttgatccaagaccagcggggttatcgcaatctgatcgagctcgtc
tcgcgcagctttctcaagggtcaagaggccggtttcccccaggtcgatccggcatggatc
aagggacatcaccagggcctgatcgcgctcgcaggcccaggcagcgacctggccgaggcg
ctggtgaagggtcgcaccaaagaggccgagcgggtcctcgaccgttggctcaaggttttt
ggcgatcgctattacctggagctggtacgcactgggcgaggccgggaaggccactggatc
gaggcgtgcgttgacctcgccctccgccgcggggtgccggtagttgcgaccaacgatgtg
cgtttcttgagcccggacgacttcgaggcccatgaggtgcgggtctgtatccatcagggg
cgcatgctggatgaccccgaccgcccgcggctctatagcgaggaacaatatctgcgcacc
cccgccgagatgtctgagctctttgccgatctccccgaggccctggtcaatgcggtcgag
atcgccaagcgctgtaacctggagcttaagctcggcaagccgcatttgcccatctttccc
gtgcctgccggcatgaccactgagtcgttctttgccgaggagtgccgccgcggtctgaac
gaacgactcagccacatcctggaccccgccgaccctgactctgccgagcggcgccggctc
tatgaggagcggctggagagcgagcttgccgtcatcacccagatgggctttgccggttat
ttcctgatcgtcgccgacttcatccgctgggccaaggaaaacggcatccccgtaggcccc
gggcgcggttcgggggcaggttcattggcggcctatgccatccggatcaccgatcttgac
ccgatcgcccacaacctcctgtttgaacgctttttgaacccagagcgggtgtcgatgcca
gacttcgacatcgacttctgcatggagggacgcgaccgcgtcatcgaatatgtcgcccaa
aaatacgggcgcgaggcggtctcccagatcatcaccttcggcaccatggccgccaaggcg
gtggtgcgcgatgtcgggcgggtgatgggctatccgtatggattcgtcgataagatcgcc
aagatggtccccttcgagccagggatgacgctggataaggcgctcgccgagagtgaggac
ctcaggcgcgtctatcaggacgacgaggaggtgcgagcgctgatcgacatggcgcgcaag
ctcgagggtctgacccgtaacgccggcaagcacgccggcggggtggtgatcgcccctggc
aagctcaccgacttcacgcccctctattgcgaaccgggtggcgaggacccggtcactcaa
tacgacaaagatgacgtcgaacaggtcgggctcgttaagttcgattttttgggactgcgc
acgctcaccatcatcgattgggcgctcaagaccatcaatgcccaacgcgcggcgcgcggc
gagtcactcatcgatctcgagcgcatcgacccccatgaccctgacgccttcgccatgctc
aaacgctgcgagaccacagcggtctttcagcttgaatcgcgcgggatgcgcgagctgatc
aaaaagctccagcccgattgcttcgacgacatcaccgcgctggtggccctctttcgccct
ggacctttgcagtcggggatggtcgatgactttatcgagcgcaagcacgggcgtgcccca
atcctttacctccatccccatcttgagccgatcctcaagcccacctacggcatcatcctc
taccaagaacaggtgatgcagatcgcccaggtcctcgccggttattcgctcggtggcgcc
gacctcctgcgcagggcgatgggcaagaagaagccagaggagatggccaagcagcgggca
acctttgagtcaggtgccgaggcgcgcggggtcgatcgccagctcgccgcccagatcttt
gatctcatggagtatttttctggatatggatttaataagtcacactcggcggcttatgca
cttgtcagctatcagaccctatggctgaaagcgcattatccggcggcgttcatgtcggcg
gtcctctcggcggacatggacaataccgacaaggtggtcaccttgatcgacgagtgtcgc
tcactcggtctgcgcatcgagccgccggcgatcaaccactcggactatcgcttcagcatc
gccagggagaaggcgatcctctatggtctgggagccatcaagggggtcggggcgtcggcg
atcgaggccatcctccaggcgcgcgcccaaggccccttccgcgacctctgggatctgtgc
atgcgggtggatctacagcgggtcaaccggcgggtccttgagtccctgatccgtgcgggg
gcgctcgatgccctgggccccaatcgcgccaccctgatggggcatctacccctggcgctt
cgggccgctgagcaatatcgcgagcgccgcgccgccggtcaggtagatctctttggcgcc
tcaggatcgagcgatccaccgcgccctgatccccagaccgccggtgagtcgcttcccgat
tgggaggacgaggaacggctgcgcggcgaaaaggagaccctcgggctttatctcaccggc
cacccgctggcgcgctatgaagatgaacttcgctccatgggctgcatccgcatcgcacgt
ctgctcgagaccgaccgcgagcttgggcggcgtgaacgcgagctctaccatctggtgggc
ctggtcgtcaatgtccgccatagcaagggcagccgcggacggctggggtcgatggtgctc
gatgaccgcacggggcgcatcgaggtcacagtcttttccgaactctatgagcaggtgcgc
cctttgcttgcaatcgatcagatcctcagcgtcagggggaccttgagtttcgatgatttt
cgcgacacctggtcgctacgcgccgactcggtacgcctctttgaggaggcgcgcgcggcg
agcgcccatcatctgttcctcctactcgatctgtccgaccctgccgctcatgcccaagga
ctggagcgggtgcgggcactccgcgagctcttggccgattatcgcgagaccgacccccag
cgcagcctgccgatccgtctgctctatcgctgcccaggggcccagggcgaactgatgctt
ggacgcgcttggcgggtgaggcccgcggacgccctgctcaaggagttgcgccaattgctg
ggtccaacgggggtcagcgtttcctatgagcgcctaccccaatcgctccctggcccagaa
gcactgccacggctatcggcagtgtcttga
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