Caldichromatium japonicum: GWK36_03625
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Entry
GWK36_03625 CDS
T07151
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cjap
Caldichromatium japonicum
Pathway
cjap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cjap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GWK36_03625 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjap03021
]
GWK36_03625 (rpoA)
03400 DNA repair and recombination proteins [BR:
cjap03400
]
GWK36_03625 (rpoA)
Enzymes [BR:
cjap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GWK36_03625 (rpoA)
Transcription machinery [BR:
cjap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GWK36_03625 (rpoA)
DNA repair and recombination proteins [BR:
cjap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GWK36_03625 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
BetaGal_dom3
Motif
Other DBs
NCBI-ProteinID:
QIK37228
UniProt:
A0A6G7VBK1
LinkDB
All DBs
Position
720061..721068
Genome browser
AA seq
335 aa
AA seq
DB search
MADAIGEFLKPRIVKVDQVDGNRCHARVSLEPLERGFGHTLGNALRRILLSSIEGYAVTE
VEIQGVLHEYTTLPGVQEDVLEILLNLKQLAISLKGKDEATFTLSKSGPGPVTAADIAID
HTAEIANPDLVIANLTNGELSMTLTVRRGRGYEPAVQRELDGHEDRPIGKLPLDASFSPI
RRVAIEVQSARVEQRTDLDRLVIDLETNGTIDPKEAIQRAAAILRDQLASFIDLDGAVPT
EMTAHEVRSELPYDPILLRPVDDLELTVRSANCLKAENIYLIGDLIQRTEVELLKAPNLG
KKSLTEIKDQLAARGLSLGMRLENWPPENIAELTR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgctattggcgaatttctcaagccgcgcatcgttaaggttgatcaagttgac
ggcaaccgctgtcatgcccgggtctcacttgaaccgctcgagcgcggtttcggccacacg
cttggtaacgctctaaggcgcatcctattgtcgtcgatcgagggatatgccgtcactgag
gtggagatccaaggtgtgctgcatgagtacactacacttcctggtgttcaggaagacgtc
ctggagattctgctaaacctcaagcaattggctatctctctcaagggcaaggatgaagcg
acctttaccctgagcaagagcgggccagggccggtaacggctgctgacattgccatcgat
catacggccgagatcgccaaccccgatctggtgatcgccaacctgaccaacggcgagctg
agcatgaccctgactgtgcgccgtggacggggctatgaaccggcagtacagcgcgaactc
gatggtcatgaagatcggcccatcggcaagctgcctttggatgcatcgttcagtccgatc
cggcgcgtggcaatcgaggtgcaatccgcacgcgtcgagcaacgcaccgacctcgaccgt
ttggtcatcgatctggagaccaatggcactatcgaccccaaggaggctatccagcgcgct
gccgcgatcttgcgcgaccagctagccagcttcattgacctcgatggtgccgtgccgacc
gagatgactgcgcatgaggtgcgcagcgaactgccctatgacccgatactgctgcgtccg
gtcgatgatcttgagttgacggttcgttccgcgaactgtctcaaggctgaaaatatctac
ctgatcggcgatctcatccaaaggaccgaggttgagctgctcaaagcgcctaacctgggc
aaaaaatcgctcaccgaaattaaggatcagctcgccgcccgtggcctatcgctaggcatg
cgtcttgagaactggccaccagagaatatcgccgagctcacgcgctga
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