Caldichromatium japonicum: GWK36_03950
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Entry
GWK36_03950 CDS
T07151
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
cjap
Caldichromatium japonicum
Brite
KEGG Orthology (KO) [BR:
cjap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjap03009
]
GWK36_03950 (rsmB)
Enzymes [BR:
cjap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
GWK36_03950 (rsmB)
Ribosome biogenesis [BR:
cjap03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GWK36_03950 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
Methyltransf_25
PCMT
Methyltransf_5
Methyltr_RsmF_N
Methyltransf_24
FtsJ
MTS
DUF3322
Motif
Other DBs
NCBI-ProteinID:
QIK37284
UniProt:
A0A6G7VBD4
LinkDB
All DBs
Position
complement(801822..803183)
Genome browser
AA seq
453 aa
AA seq
DB search
MARVLTKSRQSIEVARKTPGAASRAAAARLLRDVRTGRRSLGGLLSGDPTGQSDADRALL
QELVYGSLRHLVPLTCIADRLLDRPLKERDAELYDLILIGLYQLAFSQIPPHAVVSATVE
AARTIGKPHLAGLVNALLRRFLREQADLLAWVMRQPEARWPYPAWLIEHLRTDWPDDWEA
IVQASQGRAPMAVRVNPLRCSRADYLDTLAAAGIAARPIAELPTGILLDQPHLMRELPGW
ERGWVSVQDSGAQLAALLLAAPAGARVLDACAAPGGKTAAILEQARGELELIAMDHDPAR
LETAERLLKRLGLKAQLLVADAADPQGSWTERPFDRILLDVPCSATGVMRRHPDIPWLRR
PKDIPALVATQARMLEAIWPLLRPGGRLLYATCSLFAQENEVQVADFVGRHPEAQVLLLC
HPWGRPRPPGLQLLPRPGGHDGFFYALIAKAAS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgttttgactaagagccggcagagcatcgaagttgctcgcaagaccccgggc
gctgcgtcacgcgcagcggcagcgcgtctgctgcgcgacgtgcgcacgggcaggcggtcg
ctcggaggtcttttgtccggggatccaaccggtcaatccgatgccgatcgcgcgttgctc
caggaattggtctatggctcactgcgccatctggtgcccttaacctgtatcgccgaccgg
ctgctcgatcgcccgctcaaggagcgcgacgccgagctctatgacctcatcctgataggg
ctctatcagctcgccttcagccagatcccaccccatgccgtggtctcggccacggtcgag
gcggcgcgtacgatcggcaagccgcatctcgctggcctggtcaatgccctgctgcgtcgc
ttcttgcgcgagcaggcagacctgcttgcctgggtcatgcgccagcccgaggcccgctgg
ccctatcccgcttggctgatcgagcacctgcgcaccgattggccggatgattgggaggca
atcgtccaggccagccaggggagagcaccgatggcagtgcgcgtcaatcccctgaggtgc
tcacgggcggactatctcgataccctagcggcggcagggatcgcagccagacccatcgcg
gaacttccgaccggcatcctgctcgatcagccccacctcatgcgcgagctgccaggatgg
gagaggggctgggtctcggtccaagacagcggggcccagcttgctgccctgctgctcgct
gccccagccggcgcacgggtgctcgatgcctgcgccgcgcctggcggcaagaccgcggcc
atcctggagcaggcgcgcggtgagctggagctcatcgccatggatcatgatcccgcgcgt
cttgagaccgccgagcggctgctcaagcgcctgggactcaaggcccagctcttggtcgcc
gatgccgccgatccacaagggagctggacggagagacctttcgaccgcatcctactcgat
gtcccctgctcggcgaccggggtgatgcgccgtcatcccgatatcccctggctgcgccgg
cctaaggacatccctgccctggttgcgacccaagcaaggatgctggaggccatctggccg
ttgctgcgccccggtggacgcctgttatatgccacctgctcgctcttcgcccaggagaac
gaggtgcaggtcgctgactttgtggggcgccaccccgaggcgcaggtcctgttgctttgc
cacccctgggggcgtccccgcccaccgggtttgcaactcctgcccaggccgggcggacat
gatggttttttctacgcgctcatcgcgaaggccgcctcatga
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