Caldichromatium japonicum: GWK36_04485
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Entry
GWK36_04485 CDS
T07151
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
cjap
Caldichromatium japonicum
Brite
KEGG Orthology (KO) [BR:
cjap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjap03032
]
GWK36_04485
03036 Chromosome and associated proteins [BR:
cjap03036
]
GWK36_04485
03400 DNA repair and recombination proteins [BR:
cjap03400
]
GWK36_04485
DNA replication proteins [BR:
cjap03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GWK36_04485
Chromosome and associated proteins [BR:
cjap03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GWK36_04485
DNA repair and recombination proteins [BR:
cjap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GWK36_04485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QIK37363
UniProt:
A0A6G7VBB2
LinkDB
All DBs
Position
912078..912350
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AA seq
90 aa
AA seq
DB search
MNKSDLIEKMAEAADISKAAAARALDAFTDAVAVALKEGDTVSLTGFGTFSVKERAARKG
RNPQTGATIEIKASKTPSFKAGKALKDAIQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatccgatctcatcgagaaaatggcagaggcagctgacatttccaaagcagcg
gccgcgcgagccctggacgccttcactgatgcggtcgccgttgcgctcaaggagggtgac
actgtatcattgactgggtttggtaccttctcggtgaaagagcgcgcagcgcgcaaaggc
cgcaacccgcagactggggccaccatcgagatcaaggcgtcgaaaacaccttcatttaaa
gctggcaaagcactcaaggacgcgatacaataa
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