Caldichromatium japonicum: GWK36_05000
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Entry
GWK36_05000 CDS
T07151
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cjap
Caldichromatium japonicum
Pathway
cjap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cjap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GWK36_05000 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjap03400
]
GWK36_05000 (mutM)
Enzymes [BR:
cjap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GWK36_05000 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GWK36_05000 (mutM)
DNA repair and recombination proteins [BR:
cjap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GWK36_05000 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7695
Motif
Other DBs
NCBI-ProteinID:
QIK37441
UniProt:
A0A6G7VBP8
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All DBs
Position
complement(1013062..1013904)
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AA seq
280 aa
AA seq
DB search
MPELPEVETTRRGLLPHIEGQTIIKLLVREYRLRQPIPFDLGERLEGQTITAVIRRGKYL
IIGLHQGSLLIHLGMSGSLRIVEDKHPYLPHDHVEFLLANGKWLRFHDPRRFGLFSWIPQ
TPEQAISEHPLLCRLGPEPFANEFDGEYLWRIGRRRCSAVKPFIMDGRVVVGVGNIYATE
SLFQSRIHPAYPCNQIDLDGYQRLAENIRLVLLAAIEQGGTTLRDFVSESGAPGYFRQSL
MVYGRSGEFCKRCGGLIEGVRLSGRMSCYCSGCQVWWGRS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgccagaggtcgaaacgacgcggcggggcctcctcccccatattgagggt
caaacgatcattaaactactggtgcgcgaatacaggttgcgacaacctatcccctttgat
ctaggtgagcggctcgaagggcagacgattacagcagtgataagacggggaaaatatctc
atcataggccttcatcaaggcagcctattaatccatctcgggatgtcaggcagcttacgc
atcgtcgaggataaacacccctatctcccacatgaccatgtagaattcctcttagccaat
ggaaaatggctgcgtttccacgacccgcgacgctttgggctgttctcttggataccacag
acacccgaacaagcaattagcgaacacccattgctttgtaggcttgggcctgaacctttt
gccaatgagtttgatggcgaatatctctggcgaattggccgtcggcgttgcagcgctgtt
aaaccattcatcatggatgggcgggtagtggtgggggttgggaatatctacgccaccgaa
tccctttttcaaagccgcattcatcctgcatatccttgcaatcagatcgacttggacggc
tatcagcgtctagccgagaacattcgccttgtgttgctcgcagctattgaacaaggaggg
acgacgctgcgcgattttgtcagcgagtccggtgcgccaggttattttaggcaatcgctt
atggtctatggtcgttctggggaattttgcaaacgctgtggtggattgatcgagggggtg
cgtctttcagggcgcatgagttgttattgttctgggtgtcaagtgtggtggggtagatct
tga
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