Caldichromatium japonicum: GWK36_05050
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Entry
GWK36_05050 CDS
T07151
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
cjap
Caldichromatium japonicum
Pathway
cjap02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cjap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GWK36_05050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cjap02022
]
GWK36_05050
02035 Bacterial motility proteins [BR:
cjap02035
]
GWK36_05050
Two-component system [BR:
cjap02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
GWK36_05050
Bacterial motility proteins [BR:
cjap02035
]
Pilus system
Twitching motility proteins
GWK36_05050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
AAA_16
VpsR
Mg_chelatase
Pre_tape_measure
PG_1098_Fer
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QIK37450
UniProt:
A0A6G7VC18
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All DBs
Position
1021849..1023198
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AA seq
449 aa
AA seq
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MPKPLALVVDDEADLLELIRITLARMGVDAVTAPTLAEAKRQLEQQRIDLCLSDLNLPDG
SGLDLVQHIAAHYPDLPIAMITAYGSMESAVAAMKAGAFDFVAKPVDLAALRNLVEAALR
LRGRSVLATDAGEGVADTPLIGSSNVMQQVRALIAKLARTQAPVFITGESGTGKELAARL
IHTQGLHRRGSFVPVNCGAIPPDLVESELFGHKKGSFTGAVADKPGLFQVAAGGTLFLDE
VAELPLPAQVKLLRAIQEKAVRPVGAAREISVDIRLISASHRDLVREVEEGRFRQDLFYR
INVIELRMPALREHPEDIPELAEYILGRLAKRTAGRPTGHCPKLSAEAVAALQHYPFPGN
VRELENILERALALCEGDSIRLADLYLQEPLSSKATADRHEIAVDRVPVSIPNELSLQER
DLEAAASALGLTSLALRYRLKRLGIGLGR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcccttggccctcgtggtcgatgacgaggccgatctactggagctgatccgt
atcaccctagccaggatgggggtggatgcagtgacggcgccgacattggccgaggccaag
cgtcaactcgagcagcagcgcatcgacctttgcttaagcgaccttaatctgccggatggc
agcggtttagacctggtccagcatattgcagcccactatccggatctaccgatcgccatg
atcactgcctatggcagtatggaatcggcggtagcggccatgaaggccggtgccttcgac
ttcgtggctaagccagtcgatcttgccgcgctgcgcaatctggtcgaagcggccttgcgt
ctgcgtgggcgctctgtcttagcaacagatgcaggcgaaggtgttgctgatacgcccttg
atcggcagctcgaacgtcatgcagcaggtccgcgccctgatcgccaagcttgcccgcacc
caggccccggtctttatcaccggtgagagcgggacgggtaaagagttggcggcgcggctg
atccatacccaagggctgcatcgtcgcggttcatttgtgccggtcaattgtggcgcgatc
ccccctgacctggtcgagagcgagctgttcggtcataaaaaaggtagcttcaccggggcg
gttgccgataagcccggcttattccaggtcgctgctgggggaacattgttcctcgacgag
gtcgccgagttgccccttccggcccaggttaagctgttgcgcgcaatccaggaaaaggcc
gtacgtccagtcggtgccgcacgtgagatctccgtcgatatccggctcatcagcgccagt
caccgcgatcttgtccgcgaggtcgaggaaggccgtttccggcaagatctgttttatcgc
atcaatgtcatcgagctgcgcatgcccgccctgcgcgagcatcctgaggatatcccagag
ctcgcggaatatatccttggacgccttgccaagcggacagcggggcgacctactggacac
tgtccgaagctgtcggctgaagccgtggcagcgttgcaacattatcctttcccaggcaat
gtgcgcgaattagaaaatatcctagaacgggcccttgccttgtgcgaaggcgactctatc
cgcttagcggatctgtatttacaagaacctctcagcagcaaggccactgccgatcgccat
gagatcgcggttgatcgggtgccggtcagtatcccgaatgagctgagcttgcaggaaagg
gacctagaggcagcggcgtcggcgcttggcctcacctctttggcattgcgctatcggtta
aagcgtctggggatcggcctggggagatag
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