Caldichromatium japonicum: GWK36_06020
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Entry
GWK36_06020 CDS
T07151
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cjap
Caldichromatium japonicum
Pathway
cjap03030
DNA replication
cjap03430
Mismatch repair
cjap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cjap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GWK36_06020 (dnaQ)
03430 Mismatch repair
GWK36_06020 (dnaQ)
03440 Homologous recombination
GWK36_06020 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjap03032
]
GWK36_06020 (dnaQ)
03400 DNA repair and recombination proteins [BR:
cjap03400
]
GWK36_06020 (dnaQ)
Enzymes [BR:
cjap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GWK36_06020 (dnaQ)
DNA replication proteins [BR:
cjap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GWK36_06020 (dnaQ)
DNA repair and recombination proteins [BR:
cjap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GWK36_06020 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
QIK37611
UniProt:
A0A6G7VC67
LinkDB
All DBs
Position
1225774..1226502
Genome browser
AA seq
242 aa
AA seq
DB search
MRQIVLDTETTGLEPCEGHRIIEIGCIELIDRRLTGNNFHLYLNPERAIDLDAVNVHGIT
AEFLAQKPKFAEIAESLLDYLRGAELIIHNAAFDVAFLDHELQLWKGESAPRVAELCGIC
DTLSLARQLFPGQRNSLDALCKRYAIDNSKRIAHGALLDAGLLAEVYLAMTGGQVALHLG
DELRRDPGAGRGLGSRGHIDPQRPPLRVVRASDEEEMAHRARLAAIEAASGQCVWLSEDR
SV
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagattgtgctagacactgagacgactggtcttgaaccgtgcgaaggccatcgg
atcatcgagatcgggtgtatcgagctgatcgaccggcgactgaccggtaataattttcat
ctctatctcaaccccgagcgggcgatcgatctggatgcagtcaatgtccatggcatcacc
gctgagttccttgcccagaagcccaaatttgccgagatcgccgaatccctgctcgactat
ctgcgcggggctgagctgatcatccataacgctgctttcgatgtagcctttttggatcat
gaattgcagctatggaagggcgagtcggcaccgcgggtcgctgagctttgcgggatctgc
gataccctgagcctggcgcgtcagctctttccggggcagcgcaatagcctcgatgccctg
tgcaaacgctacgccatcgacaattccaagcggatcgcccatggcgcccttctcgatgcc
gggctcttggccgaggtctatctggcgatgaccggtggtcaggtcgcgttacatctgggc
gatgagctcaggcgtgaccctggggccgggcgtggtcttggctcgcgtgggcacatcgac
ccacagcgtccacccctgcgggtagtgcgggcaagcgacgaagaggagatggcccatcgc
gctcgcctggcggcgattgaggcagcaagcgggcaatgcgtttggttgagcgaggatcgc
tctgtctga
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