Caldichromatium japonicum: GWK36_10875
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Entry
GWK36_10875 CDS
T07151
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cjap
Caldichromatium japonicum
Brite
KEGG Orthology (KO) [BR:
cjap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjap03016
]
GWK36_10875 (truB)
Enzymes [BR:
cjap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GWK36_10875 (truB)
Transfer RNA biogenesis [BR:
cjap03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GWK36_10875 (truB)
Prokaryotic type
GWK36_10875 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QIK38397
UniProt:
A0A6G7VF28
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All DBs
Position
complement(2245267..2246181)
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AA seq
304 aa
AA seq
DB search
MGRRPPGRPITGILLLDKPAGLTSNAALQQIKSHYRARKAGHTGSLDPLATGLLPCCLGD
ATKFSAFLLDADKRYRVRIHLGVTTATGDAEGEVLATAPVGDLSADQIRAVLDRFIGPLD
QLPPMYSAVKHQGERLYRLARQGIEVDRQPRRIHIHALSLVALKLPEIEVDVHCSKGTYI
RTLAEDIGRALGCGAHVSALRRMGVGPYIEPGASFITSERIAALAEQGDFNALDALLLPL
DTALGHYPALRLSPDAAFYLQQGQAVLVPQAPAEGWVRLYDPNARFIGVGEISDDGRVQP
KRLL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtcgtccgcctggacgcccaatcactgggatcctcttgctggacaagccagca
ggtctgacctcgaacgccgccctgcaacagatcaagagccattatcgtgcgcgcaaggca
gggcatactggcagcctcgaccccttagccactggtctcctgccctgctgtctaggcgat
gcgaccaagttctcggcctttttactagacgccgataagcgttatcgggtgcgcatccat
ttgggggtgaccaccgcgaccggcgacgccgagggtgaggtgttggctacagcgccggtc
ggcgacctgagcgcagaccagatccgcgctgtcctcgaccgtttcatcggcccgctcgat
caattgcctcccatgtattcggcggtcaaacatcaaggcgagcggctgtatcgtctcgcg
cgtcaggggatcgaggtcgatcgccagccgcgccggattcacatccatgcgctgtctctg
gtggcgctcaagctgcctgagatcgaggtcgatgtgcactgctctaaagggacctatata
cgcaccctcgccgaggatatcggtcgggcgctgggctgcggcgcccatgtcagtgccctg
cgccgaatgggtgtgggaccctatatcgaaccaggggcgtcctttatcacgagcgagcgg
atcgccgcccttgctgaacagggcgatttcaacgccctcgacgccctgctcctgcccctc
gatactgcactcgggcactacccggccctgcggctttccccggatgccgccttttatctg
caacaggggcaagcggtgctggtgccccaggcgcccgccgagggctgggtgcgattatat
gatcccaacgcccgctttatcggtgtcggcgagatcagcgacgatggccgtgttcagccc
aagcgacttctgtga
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