Caldichromatium japonicum: GWK36_13205
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Entry
GWK36_13205 CDS
T07151
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cjap
Caldichromatium japonicum
Pathway
cjap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GWK36_13205 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjap03019
]
GWK36_13205 (pcnB)
Enzymes [BR:
cjap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GWK36_13205 (pcnB)
Messenger RNA biogenesis [BR:
cjap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GWK36_13205 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF6932
Motif
Other DBs
NCBI-ProteinID:
QIK38779
UniProt:
A0A6G7VFG0
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All DBs
Position
complement(2701614..2702939)
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AA seq
441 aa
AA seq
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MLDSKSTTGLIERPGQPRVIPRSEHGISRAQISEHALEVLRRLRQQQFQAHLVGGGVRDL
LLGREPKDFDVVTDATPEQVRQVFRNCRLIGRRFRLAHVYFGREIVEVATFRGSGADEEA
DGARQIRNGMIVRDNLYGTIEEDALRRDFTINALYYDIADRSLIDYAGGFDDLRAGLLRL
IGDPEKRYREDPVRMLRAVRFACKLGFNIEPGAERPLFKLGSLLRHVPGARLFDELIKLF
HSGYAVAAFEKLRHYGLFGYLFPATESCLATEDRGFPITFVNLGLANTDQRIAEDKPVTP
AFLYAILLWEPVRRRWDSLMTDGLGAQEAIQEAIAELNPREQTSILIPKRITLPMREIWS
LQPRFFERTGKRVHRLLAHPRFRAAYDFLLLRAAAGEADGELAEWWTRFQEASAPERERM
TEVKVQRRGRGRRRPRAAEHA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgctggactcaaaatccactactggtctgatcgagcgccctggccagccgcgggtaatc
ccccgttccgaacacggcatctcgcgtgcccagatcagcgagcatgcgcttgaggtgctc
cgtcgcctgcgccagcagcaatttcaggcacatctggtcggcggtggggtacgcgacctt
ctgctcggccgtgagcccaaggatttcgatgtggtcacggatgccacccccgagcaggtc
cgccaggtgtttcgcaactgtcggctgatcgggcggcgctttcgcctggcccatgtctat
tttggacgcgagatcgtcgaggtcgcgacctttcgcggtagcggcgcggatgaagaggca
gacggcgcccgccagatacgcaacggcatgatcgtgcgcgataacctctacggcacgatc
gaagaggacgccttgcgccgcgatttcaccatcaatgccctgtattacgacattgccgat
cgatccctgatcgattatgccggcggtttcgatgacctacgcgctggcctcttgcgcctg
atcggcgatcccgagaaacgctatcgcgaggacccggtgcgtatgctgcgtgcggtgcgc
tttgcctgtaagctcggtttcaacatcgagccaggtgccgagcgcccgctgttcaaactg
gggtccctgctgcgccacgtacctggcgcgcgcctgttcgatgaactcatcaagctcttt
cactccggctatgccgttgcagccttcgaaaagctgcgccactatgggctgttcggctat
ctctttccggcgactgaatcctgtctagcgacggaggaccggggttttccgatcaccttc
gtcaatttggggctggccaataccgatcagcggatcgccgaggataagccggtgaccccg
gcctttttatatgccatcctgctctgggagccggtgcgtcggcgttgggattccttgatg
acagatgggttaggggctcaggaggcgatccaagaggccatcgctgagctcaatccgcgc
gaacagacatccatcctcatccccaaacggatcaccctgccgatgcgcgagatctggagc
ctccagccgcgattcttcgaacgcaccggcaagcgtgtccaccgccttttggcccatccg
cgttttcgcgcggcctatgactttttgctgctgcgcgccgcagcgggcgaagcagatggc
gagctggccgaatggtggacgcgcttccaggaggcaagcgcccccgagcgcgaacggatg
accgaggtcaaggtccagaggcgcggtcgtgggcgccgccggcctcgggccgcagagcac
gcctga
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