Caldichromatium japonicum: GWK36_14115
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Entry
GWK36_14115 CDS
T07151
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
cjap
Caldichromatium japonicum
Pathway
cjap02020
Two-component system
cjap02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cjap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GWK36_14115
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GWK36_14115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjap03000
]
GWK36_14115
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cjap02035
]
GWK36_14115
Transcription factors [BR:
cjap03000
]
Prokaryotic type
Helix-turn-helix
Other families
GWK36_14115
Bacterial motility proteins [BR:
cjap02035
]
Flagellar system
Flagellar assembly proteins
Others
GWK36_14115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
HTH_30
Mg_chelatase
AAA
AAA_16
AAA_19
AAA_3
AAA_30
AAA_2
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QIK39270
UniProt:
A0A6G7VH99
LinkDB
All DBs
Position
complement(2899178..2900542)
Genome browser
AA seq
454 aa
AA seq
DB search
MRIGVYGDPQKCLATRHILAFLGQDVAELSGQRAGDLGLDALWVCDTGAALARLLMQVPA
GLGLVLQPTDGDSTQMPYRERTYVIASPLRPGLVIEVLQRLAFASVPEPLEAPDLVGRHP
RMLAVKRLIAQVASTDATVLILGETGSGKELVARAIHAASSRADKPFVAVNCGAIPADLL
ESELFGHEKGAFTGAFTSRAGRFELAGDGVLFLDEIGDMPLPMQVKLLRVLQERTFERVG
SNKPIHTNARIISATHRDLEQAVAVGQFRQDLFFRLNVFPIELPPLRERASDLPLLIEAF
AVRMRAQGQAPAHLTPAALDHLSQYPWPGNVRELANLLEQLAIMYPDALVDLHQLPRRFR
PDGLESLPQPPDCAMPDASVQLTPAGADPLPPEGVELREYLNDLERRMILSALVQNDFVV
ARAARRLGMRRTTLVERMRKFGLERDARQELSEL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcggtgtctatggtgacccccagaaatgcctggcgacgcgccatatcctggcg
tttttgggccaggacgtcgctgagctgagcggtcagcgggccggcgacctggggctcgat
gccctttgggtctgcgacacgggcgccgcgctcgctaggctgctgatgcaggtcccagca
ggtttggggctggtcttgcagccgaccgacggtgactcgacccagatgccatacagggag
cgcacctatgtcatcgcatcaccgctgcgtcctggcctggtgatcgaggtcctacagcgg
ttggcgttcgctagcgttcccgagcccctggaagcgcccgatctagtggggcggcatccg
cggatgctggcagtcaagcgtttgatcgcccaggttgcctccaccgatgcgaccgtactg
atcctgggtgagaccggctcgggcaaggagctggtggcgcgtgccatccatgccgcatcc
agtcgcgccgacaagcccttcgtggcggtcaactgtggcgcgatccctgcggatctcttg
gaaagcgagctgtttggccatgagaagggtgccttcaccggcgctttcaccagccgcgcc
gggcgtttcgagctagcaggggacggggtgctctttctcgacgagatcggcgatatgccc
ctgccgatgcaagtcaagctgttgcgggtgcttcaggagcggacctttgaacgggtgggt
tcgaacaagcccatccacaccaatgcccgcatcatctcggcgacccatcgcgacctagag
caggcggtggcagtgggtcagttccgccaggatctcttctttcgcctcaatgtctttccc
atcgagctgccgccgctgcgcgagcgtgctagtgacctccccctgttgatcgaggccttc
gctgttcgcatgcgcgcgcaagggcaggcgccggcccatctaaccccagcggccttggac
catctcagtcagtatccttggccgggcaatgtgcgcgagctggcgaacctgctcgaacag
cttgcgatcatgtatcccgatgccctggtcgatctccatcagctcccgcgccgtttccgt
cccgatggccttgaatccttacctcagcctccagactgcgcgatgcccgatgcgagcgtc
cagctgacccccgccggcgccgatccactaccgcccgagggggtcgagctgcgcgaatat
ctcaatgacctcgaacggcgcatgatcctgagcgcgctcgtccaaaacgattttgtcgtt
gcccgcgcagcgcgtcggctggggatgcggcgtactaccctggtcgagcgcatgcgcaag
ttcggcctcgagcgcgacgcccgccaggagctctctgaactctag
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