Campylobacter jejuni subsp. jejuni NCTC 11168-BN148: BN148_1001
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Entry
BN148_1001 CDS
T02302
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
cjb
Campylobacter jejuni subsp. jejuni NCTC 11168-BN148
Pathway
cjb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cjb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BN148_1001 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjb03021
]
BN148_1001 (rpoD)
Transcription machinery [BR:
cjb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN148_1001 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_ner
Sigma70_r4_2
MCR_beta_N
Motif
Other DBs
NCBI-ProteinID:
CCK67096
LinkDB
All DBs
Position
931191..933059
Genome browser
AA seq
622 aa
AA seq
DB search
MNAKTQEAELEELFQENAKDYITYEKLVKYLTKQPSASTTKKVQALMKKHKVQLFSAAEI
AQMKNIEDAKRLQEEKQKLQDTSLENEFDLANENDLLEWSRSDSPVRMYLREMGQIALLN
KDEEIEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLINRERRVKELFKSFDDEEKSD
DKLDELDIDEDEENETELESDEENTKKNSKKEDERTLKVIEKFKALEKAKKDWLKTSKDK
ESGDELLDKLSIAFKKNILKEKLMDLGPTSKLISEIVKSMETALKSDEEFDKELKRLEYR
LPMFSDELKKRHADILKDITKLSKEEITERALETTMVSTYMEIKKLFQTKEASEKSFDLE
KSRLKEILEQIKRGKKISDEAKGRMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIGLMK
AVDKFEYKRGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINQINKIIREHLQKD
GKEPDVSVIAKEVGLSVDKVKQVIKITKEPISLEAPIGNEDDGKFGDFVEDRNSLSPMDH
ILKDDLKEQIDEVLDQLNDREKAVIRMRFGLMDDESDRTLEEIGKELNVTRERVRQIESS
AIKKLKHPKVGRKLKNYIEGWK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaaaactcaagaagctgaattagaagaattatttcaagaaaatgcaaaagat
tatatcacatatgaaaaattggtaaaatatcttacaaaacaaccaagtgcatcaaccact
aaaaaagtgcaagcattaatgaaaaaacacaaagtgcaacttttttcagcagctgaaatt
gcacaaatgaaaaacatagaagatgcaaaaagacttcaagaagaaaaacaaaaactccaa
gatacaagccttgagaacgaatttgatttagccaatgaaaacgatttattagaatggagc
agatcagactctcctgttcgtatgtatttaagagaaatgggacaaattgctttattaaac
aaagatgaagaaattgaaatttccaaaaaaatagaacttggcgaagatattatcattgat
gctttttgttctgtaccttatttgatagattttattttagattataaagaacctttaata
aacagagaaagaagggtaaaagaactatttaaaagctttgacgatgaagaaaaaagtgat
gacaaacttgatgaacttgatatagatgaagatgaagaaaacgaaacagaattagaatca
gatgaagaaaatactaaaaaaaacagcaaaaaagaagatgaaagaactttaaaagttata
gaaaaatttaaagctctagaaaaagctaaaaaagattggctaaaaacatccaaagacaaa
gaaagcggagatgaacttttagataaattaagcattgcgttcaaaaaaaatattttaaaa
gaaaaattaatggatctaggccctacttcaaaacttattagcgaaatcgtaaaatcaatg
gaaactgcactaaaaagtgatgaagaatttgacaaagaacttaagcgtttagaataccgc
ttacctatgttttctgatgaacttaaaaaacgccatgcagatattttaaaagatattaca
aaattgagcaaagaagaaatcacagagcgagctttagaaacaaccatggtaagcacttat
atggaaattaaaaaactatttcaaactaaagaagccagtgaaaaaagctttgatcttgaa
aaatcacgcttaaaagaaattttggagcaaattaaacgcggtaaaaaaatctctgatgaa
gcaaaaggaagaatggcaaaatcaaacttgcgccttgttgtaagcatagctaaacgctac
acaaatcgtggtctgcctttcttagaccttatccaagaaggaaatataggtttgatgaaa
gctgtggataaatttgaatacaaaaggggttataaattttccacttatgcaacttggtgg
atcaggcaagctatttcaagggctatagctgatcaagcaagaaccataagaattccaatc
catatgatagaaaccatcaatcaaattaacaaaattatccgcgaacatctacaaaaagat
ggaaaagaacctgatgtcagtgttatagctaaagaagtaggtttaagcgtagataaggtt
aaacaagttattaaaatcacaaaagaaccaatttctcttgaagctccaataggaaatgaa
gatgatggtaaatttggagattttgttgaagatagaaattcactttctccaatggatcat
atcttaaaggatgatttaaaagaacaaattgatgaagttttagatcaattaaacgataga
gaaaaagcggtaattcgtatgcgttttggtttaatggatgatgaaagtgatagaacttta
gaggaaattggaaaggaacttaatgtcactcgagaaagagtgagacaaatagaaagctca
gctataaaaaaactcaaacaccctaaagtaggaagaaaactaaaaaattatatagaaggt
tggaagtaa
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