Callithrix jacchus (white-tufted-ear marmoset): 100385009
Help
Entry
100385009 CDS
T03264
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013
Nucleocytoplasmic transport
cjc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100385009 (PNN)
03015 mRNA surveillance pathway
100385009 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100385009 (PNN)
03041 Spliceosome [BR:
cjc03041
]
100385009 (PNN)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100385009 (PNN)
Spliceosome [BR:
cjc03041
]
Complex C
Other components
EJC/TREX
100385009 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
100385009
NCBI-ProteinID:
XP_002753888
Ensembl:
ENSCJAG00000016291
UniProt:
U3BJN4
LinkDB
All DBs
Position
10:69722792..69731054
Genome browser
AA seq
727 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVVQREEELEETGNQHNDVEIEEAGEEEEKEIVVVHSDAEKEQEEEEQKQ
EMEGKMEDETEVRESEKQQDSQPEEVMDVLEMVENVKHVVPDQEVMETNRVESVEPSENE
ASKELEPEMEFEIEPDKECKSLSPGKENVSALDTEKESEEKEEKESEPQPEPVAQPQPHP
QPQPQSQSQPQPQPQLQSQSQPVLQSQPPSQPENLSLTVLQPTPQVTQEQGHLLPERKEF
PVESVKLTEVPVEPVLTVHPESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSS
SSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSV
DRKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKS
DRKDKRR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcagtgagaactttgcaggaacagctagaaaaggccaaagagagccttaag
aacgtggatgagaatattcgcaagctcaccgggcgggatccaaatgacgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttatta
ctgaggcgtggattctccgatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggaccagaagagaatcacgccaggaaagt
gacccagaggatgatgatgttaaaaagccagcattgcagtcttcagttgtagctacctcc
aaagagcgcacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccggcgaatatttggcttgttgatgggtacccttcaaaaatttaaacaagaatcc
actgtcgctacagaaaggcaaaagcggcgccaggaaattgaacaaaaacttgaagttcag
gcagaagaagagagaaagcaggttgaaaatgaaaggagagaactgtttgaagagaggcgt
gctaaacagacagaactgcgacttttggaacagaaagttgagcttgcgcagctgcaagaa
gaatggaatgaacataatgcgaaaattattaaatatataagaactaagacaaagccccat
ttgttttatattcctggaagaatgtgtccagctacccaaaaactaatagaagagtcacag
agaaaaatgaatgctttgtttgaaggtagacgaattgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggttcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaaatagtggttgtgcatagcgatgcagagaaagaacaggaggaggaagaacaaaaacag
gaaatggagggtaagatggaggacgaaactgaggtaagggaaagtgagaagcagcaggat
agtcagcctgaagaagttatggatgtactagagatggttgagaatgtcaaacatgtagtt
cctgaccaggaggtaatggaaacgaatcgagttgaaagtgtagaaccttcagaaaatgaa
gctagcaaagaattggaaccagagatggaatttgaaattgagccagataaagaatgtaaa
tccctttctcctgggaaagagaatgtcagtgctttagacacagaaaaggagtctgaggaa
aaagaagaaaaagaatctgagccccaacctgagcctgtggctcagccccagcctcatcct
cagccccagccccaatctcagtctcagccccagcctcagcctcagcttcaatctcagtcc
caaccagtactccagtcccagcctccctctcagcctgagaatttgtcactaactgtttta
cagccaacaccccaagttactcaggagcaagggcatttactgcctgagaggaaggagttt
cctgtagagtctgtgaaactcactgaggtaccggtagagccagtcttgactgtacatcca
gagagcaagagcaaaaccaaaactaggagcagaagtagaggtcgagctagaaataaaaca
agcaagagtagaagtcgaagtagtagcagtagtagttctagtagcagttcaaccagtagc
agcagtggaagtagttccagcagtggaagtagtagcagtcgaagtagttccagtagcagc
tccagcacaagtggcagcagcagcagagatagtagcagcagcaccagtagtagtagtgag
agtagaagtcgaagtaggggccggggacataatagagatagaaagcacagaaggagcgtg
gatcggaagagaagggatacttcaggactagaaagaagtcacaaatcttcaaaaggcggt
agtagtagagatacaaaaggatcaaaggataagaattcccggtccgacagaaagaggtct
atatcagagagtagtcgatcaggcaaaagatcttcaagaagtgaaagagaccgaaaatca
gacaggaaagacaaaaggcgttaa
DBGET
integrated database retrieval system
