Callithrix jacchus (white-tufted-ear marmoset): 100385066
Help
Entry
100385066 CDS
T03264
Symbol
AARS1
Name
(RefSeq) alanine--tRNA ligase, cytoplasmic
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100385066 (AARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cjc01007
]
100385066 (AARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjc03016
]
100385066 (AARS1)
Enzymes [BR:
cjc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
100385066 (AARS1)
Amino acid related enzymes [BR:
cjc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
100385066 (AARS1)
Transfer RNA biogenesis [BR:
cjc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100385066 (AARS1)
Prokaryotic type
100385066 (AARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
ARPP-2
RPN6_N
Motif
Other DBs
NCBI-GeneID:
100385066
NCBI-ProteinID:
XP_002761188
Ensembl:
ENSCJAG00000014562
UniProt:
U3C7R0
LinkDB
All DBs
Position
20:28260686..28292479
Genome browser
AA seq
968 aa
AA seq
DB search
MDSTLTASEIRQRFIEFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPS
HPMAKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALE
LLTQEFGIPIERLYVTYFGGDEAAGLEPDLECKQIWQNLGLEDTKILPGNMKDNFWEMGD
TGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDT
GMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLAD
HARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDA
FPELMKDPDMVKDIINEEEVQFLKTLSRGRRILDRKILSLGDSKTIPGDTAWLLYDTYGF
PVDLTGLIAEEKGLLVDMDGFEEERKLAQLKSQGKGAGGEDLIMLDIYAIEELRAQGLEV
TDDSPKYNYHSDSSGNYVFENTVATVLALRREKMFVEEVSTGQECGVVLDKTCFYAEQGG
QIYDEGYLVKVDDSNEDKTEFTVKNAQVRGGYVLHIGTIYGDLKVGDQVRLFIDEPRRRP
VMSNHTATHILNFALRSVLGEADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEMI
EAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSVGVPVSELLDDPSGPAGSLTSV
EFCGGTHLQNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKTSLSLMEAK
VKAQTAPNKDVQREIADLGEVLATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQKR
VLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKMHSPQTSAMLFTVDNEAGKIT
CLCQVPQNAANRGLKASEWVQQVSGLMDGKGGGKDVSAQATGKNVGCLQEALQLATSFAQ
LHLGDVKN
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggactcgactctaacagcaagtgaaatccggcagcgatttatagagttcttcaagagg
aatgagcacacctatgttcactcatctgctaccatccctttggatgaccccactctgctc
tttgccaatgcaggcatgaaccagtttaaacccatcttcctgaacacaattgacccatct
caccccatggcaaagctgagcagagctgccaatacccagaaatgtatccgagctgggggc
aaacacaatgacctggatgatgtgggcaaggatgtgtatcatcacaccttctttgagatg
ttgggttcttggtcttttggagattactttaaggaattggcttgtaagatggctctggaa
ctcctcacccaagagtttggcattcccattgaaagactttatgttacttactttggcggg
gatgaagcagctggcttagaaccagatctggaatgcaaacagatctggcaaaatttgggg
ctggaagacaccaaaatcctcccaggcaacatgaaggataacttctgggagatgggtgac
acaggcccctgtggtccttgcagtgagatccactacgaccggattggtggtcgggacgcc
gcacaccttgtcaaccaggatgaccctaatgtgctggagatctggaaccttgtgttcatc
cagtataacagggaaactgatggcattctgaaacctcttcccaagaaaagcattgacaca
gggatgggcctggagcgactggtatctgtgctgcagaataagatgtccaactatgacacc
gacctttttgtcccttactttgaagccattcagaagggcacaggtgcccgaccgtacact
gggaaagttggtgctgaggatgctgatgggattgacatggcctaccgggtgctggctgac
cacgctcggaccatcactgtggcactggctgacggtggccgtcctgacaacacaggacga
gggtatgtgttgagacgtattctccgccgagctgttcgatatgcccatgagaagctcaat
gccagcaggggcttctttgctacgttagtggatgttgttgtccagtccctgggagatgca
tttcctgagctgatgaaggacccagacatggtgaaggacatcattaatgaagaagaggtg
cagtttctcaagactctcagtagagggcgacgcatcctggacaggaaaattctgagcctg
ggagacagcaagaccattcctggagacactgcttggctcctctatgacacctatgggttt
ccagtggatctcactggattgattgccgaagagaagggcctgttggtagacatggatggc
tttgaagaggagaggaaactggcccagcttaaatcacagggcaaaggagctggtggggaa
gaccttattatgctggacatctacgctatcgaagagctccgggcccagggtctggaggtc
acagatgattccccaaagtacaattaccattcagactccagtggtaactacgtatttgag
aacacagtggctacggtgctggctctgcgcagggagaagatgtttgtggaagaggtgtcc
acgggccaggagtgtggagttgtgctggacaagacctgtttctatgccgagcaaggaggg
cagatctatgatgaaggctacctggtgaaggtggatgacagcaatgaggataaaacagag
tttacagtgaagaatgctcaggtgcgaggagggtatgtgctccacatcggaacgatctat
ggtgacctgaaagtgggggatcaggtccggctgtttattgatgagccccgacgaagaccc
gtcatgagcaaccacacagctacgcacattctgaacttcgccctgcgctcagtgcttggg
gaagctgaccagaaaggctcactggttgctcccgaccgccttcgatttgacttcactgcc
aagggagccatgtccacccaacagatcaagaaagctgaagagattgctaatgagatgatt
gaggcagctaagcctgtttacacccaggattgccccttggcggcagcaaaagccatccag
ggcctacgggctgtgtttgatgagacctatcctgaccctgtgcgagtcgtctccgttggg
gtcccagtgtccgagctgctggatgatccctctgggcctgctggctccctgacttctgtt
gagttctgtgggggaacgcatctgcagaactcaagtcatgcaggagcttttgtgatcgtg
acggaagaagccattgccaagggtatccggaggattgtggctgtcacaggtgctgaagcc
cagaaggccctcaggaaagcagagagcctgaagacatctctctctctcatggaagccaaa
gtgaaggcccagactgctccaaacaaggatgtgcagagggagatcgctgaccttggagag
gtgctggccaccgcagtcatcccccagtggcagaaggacgaattgcgggagactctcaaa
tccctaaagaaggtcatggatgacctggaccgcgccagcaaagctgatgtccagaagcga
gtattggagaagacaaagcagcttattgacagcaaccccaaccagccccttgtcatcctg
gagatggagagtggtgcctcagccaaggccctgaatgaagctttgaagctcttcaagatg
cactcccctcagacgtctgccatgctcttcactgtggataatgaggctggcaaaatcacg
tgcctgtgtcaagtcccccagaatgcagccaataggggcctaaaagccagcgagtgggtg
cagcaggtatcaggcctgatggatggtaagggtggtggcaaggatgtgtctgcgcaggcc
acaggcaagaacgttggctgcctgcaggaggcgctgcagctggccacttcctttgcccag
ctgcacctcggggatgtgaagaactga
DBGET
integrated database retrieval system
