Callithrix jacchus (white-tufted-ear marmoset): 100385227
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Entry
100385227 CDS
T03264
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013
Nucleocytoplasmic transport
cjc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100385227
03015 mRNA surveillance pathway
100385227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100385227
03041 Spliceosome [BR:
cjc03041
]
100385227
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100385227
Spliceosome [BR:
cjc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
100385227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
100385227
NCBI-ProteinID:
XP_017824653
LinkDB
All DBs
Position
14:complement(57148672..57152134)
Genome browser
AA seq
997 aa
AA seq
DB search
MYSPTQEPLGLVSPPLDTQLTWGNYKLLDQQAHYLVFDGQRAEEQRRQIKPQLYVLARRQ
MDAGFFRGTCAEQDNRFSDKQKKLLKQLKFAECLEKKVGTSKVNLEVIKPWITKRVTEIR
GFKDDVVIEFIFNQLEVKNPDYKMMQINLTGFLNGKNAREFMGELWPLLLSAQENVAGIP
SAFLELKKEEIKQRQIEQEKWAFMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRPSPVRREXKRSHSRSPGHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSAEKNSKKEKEKEKTRPRSRSRSKSRSWTRSRSPSHTRPRW
HHRSRSRSYSPRRWPSPRRRPSPRRRTPPRRMPPPPRHRSSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPLRKTRRLSPSASPLRRRHRPSPPATPPPQTRHSPTPQQS
NCTRKSRVSMSPGRTSVTKHKGTEKRESPSPAPKPRKVELSKSEEDKGGKMAAADSVQQR
RQYRRQNQQSSSDSGSSSSSQDERPKRSHVKNGEVGRRRRHSPSQSASPSPRQRQKETSP
RMQMGKRWQSPVTKSGRRRRSPTPPPTRRRRSPSPTPPPRQRRSPTPPPRRRTPSPPPRR
RSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRSASPSPSPKHQVSHSPPPKQRSSPV
TKRRSPSLSSKHRKGSSPSRSMREARSPQPNKRHLPSPRPPAPQTSSSPPPVRRGASSSP
QRRQSPSPSTRPIRRVARTPEPKKIKKAASPSPQSVXRVSSSRSVSGSPEPTVKKPPAPP
SPIQSQSPPTNWSPAVRIKKAKSPTPSPSPPRNLDQEGGGKKKKKKKDKKHXQKNKKHKK
HKKEKAVAAAAAAALTPAAIATATTTLAQEEPVAVPEPKKETESEAEDNLDDLEKHLRGR
ARWLKPVIPALWEAEVGGSRGQEIETILVTMVEPRLY
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgtattcacctactcaggaacctttaggccttgtttctcctcctctagacactcagctg
acctggggaaattacaagctgcttgaccaacaagctcattatcttgtttttgatggacag
agagctgaggaacaaagacgacaaataaaaccccagctgtatgtcctagcgaggcggcag
atggacgcgggattcttccgcggaacatgtgcagaacaggataatcggttcagcgacaaa
cagaagaaactactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtgggcacg
agcaaagtaaatttggaagttataaagccttggataacaaaaagagtaacggaaatccgt
gggtttaaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactacaaaatgatgcaaatcaacctgactggatttttaaacggaaaaaatgctcgagaa
tttatgggagaactgtggcccctgctgctaagtgcacaagaaaacgtcgcgggaatccct
tctgctttcctagagctgaagaaagaagaaataaaacaaagacagattgaacaagaaaaa
tgggcatttatgaaaaagcaagatgaagacaaagataaaagggataaggaagagaaagaa
agcagcagagaaaaaagggagaggtctcgtagcccaagaagacgcaaatccagatctcct
tcccctagaagacgaccttcccctgtcaggagagagnagaagcgcagtcattctcgatct
cccggtcacagaaccaagagccggagtccttcccctgctccagaaaagaaggaaaaaact
ccagagctcccagaaccttcagtgaaagtaaaagaaccttcagtacaagaggccacttct
actagtgacattctgaaagttcccaaacctgaacctgtaccagagcctaaagaaccttct
gcagaaaaaaattccaaaaaagaaaaggagaaggaaaagacccgaccacgatctcggtca
cgctccaaatcaagatcctggacgcggtcccgctctccttctcacactcgacctagatgg
caccataggtctcgatcgagatcatattcacctagaaggtggccaagcccaagaaggcgg
ccatctcctcgaagaagaactccaccaaggagaatgcctcctccaccaaggcatagaagc
agcagatcaccagtaagacgaagaagacgttcgtcagcatccttgtctgggagtagctca
tcatcctcttcatctcgttcccggtcaccaccaaagaaaccgcccaagaggacatccagc
ccccttcgaaaaactcgtaggttatctccttcagcaagtcctctaaggcgaaggcacagg
ccatcacctcctgcaactccaccaccccaaactcggcattccccaacaccccagcagtca
aactgtacaagaaaaagtcgtgtttccatgtctccagggagaacatcagtaacaaaacat
aaaggtactgagaaaagagaatccccttcaccagcaccgaagcctagaaaagtagagtta
tctaaatcggaagaagataaaggtggcaaaatggctgcagcagattctgtgcagcagaga
cgccaataccgacgacaaaaccagcagtcttcatctgactctggctcctcctcctcctca
caagatgaaagacccaagagatcccatgtgaagaatggtgaggttggcaggcggcggaga
cattccccttcccagagtgcctctccatcaccacgacagcgccaaaaagagacttcccct
cggatgcagatgggaaagcgatggcaatcgccagtgactaaaagtggtagacggaggaga
agtccaaccccaccacccaccagaaggcgacggtctccttcgcccacccctcctcctcga
cagcgcaggtctcccacaccaccaccacgacgaaggactccttctccacctccacgtcgg
cgctcaccttctcctagaagatattctcctccaatacagaggagatactctccttctcca
cctccaaagagaagaacggcttctcctcctccccctcctaaacgaagcgcatcaccatct
ccatcaccaaagcatcaggtctcccattctccacctcccaaacaaagaagctccccagtc
accaagagacgttcaccttcattatcatccaagcataggaaagggtcttccccaagccgg
tctatgcgggaggcccgatcaccacaaccaaacaaacggcatttgccctcaccacggcct
ccagctcctcagacctcctcaagtcctccacctgttcgaagaggagcgtcctcatcaccc
caaagaagacagtccccatctccaagtactaggcccattaggagagtcgccaggactccg
gaacctaaaaagataaaaaaggctgcttcaccaagcccacagtctgtanacagggtctca
tcctcccgatctgtctctgggtctcctgagccaacagttaaaaagcccccagcacctccg
tcccccatccagtctcagtcaccgcctacaaactggtcaccagctgtacggatcaaaaag
gccaaaagcccgacaccaagcccatcaccgccaagaaatttggatcaagaaggaggtgga
aagaaaaagaagaaaaagaaggacaagaaacacnnacaaaaaaataagaagcacaagaaa
cacaagaaggaaaaagctgtggctgcagctgctgcggctgctctaacccctgcagccatt
gcaactgccacaaccacattagcacaggaagaacccgtggcggtgccagagccaaagaag
gagactgaaagtgaagctgaagataaccttgatgacttagaaaagcacctgcgtggccgg
gcgcggtggctcaagcctgtaatcccagcactttgggaggccgaggtgggtggatcacga
ggtcaagagatcgagaccatcctggtcaccatggtggaaccccgtctctactaa
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