Callithrix jacchus (white-tufted-ear marmoset): 100385239
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Entry
100385239 CDS
T03264
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013
Nucleocytoplasmic transport
cjc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100385239 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100385239 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100385239 (NDC1)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100385239 (NDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
100385239
NCBI-ProteinID:
XP_002750891
Ensembl:
ENSCJAG00000004707
LinkDB
All DBs
Position
7
Genome browser
AA seq
776 aa
AA seq
DB search
MQRRHLLLSPRGTLLRRDILEARGRFLESQPPLWDVSEQQFWPVELVQTKPLRDGLGPGP
GFAQAAFEAAPAGSSWGLPPFELRWRAGARSSALSRLGAAISMATAVNGSCAGRSRDILW
RVLGWRIVASIVWSVLLLPICTTLFILFSSIDLFHPIQWLSDSFSDLYSSYVIFYLLLLS
VVIIIISIFNVEFYTVVPSIPCSRLALIGKIIHPQQLMHSFIHAAMGMVMAWCAAVITQG
QYSFLVIPCTGTNSFGSPVVQTCLNEYHLFFLLAGAFMGYSYSLLYFVNNMNYLPFPIIQ
QYKFLRFRRSLLLLVKHSCVESLFLVRNFCILYYFIGHIPKAWISTAMNLHIDEQVHRPL
DTVSGLLNLSLLYHVWLCGVFLLTTWYISWILFKIYATEAHVFPVQPPFAEGSDECLPKV
LNSNPPPIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISMGCLNLLNGMTQ
KLVLYQEAAATNGRVSSSYPVEPKKFSSPEETTFQTPKSSQMPRPSVPPLVKTSLFSSKL
STPDVASPPGIPFGSSVMHRMAGIFDVNTCYGSPQSPQLIRRGPRLWTSASDQQMTEFSN
PSPSTSISAEGKTVRQPNVIYSWIQNKREQIKNFLSKRVLIMYFFSKHPEASIQAVFSDA
QMHIWALEGLSHLVAASYTEDRFGVVQTTLPAILNTLLMLQEAVDKYFKLPHASSKPPRI
SGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccgacacctgcttctgtcgccccgcgggaccctgcttcggagggatattttg
gaggccagagggcggttcctggagtcacagccccctttgtgggacgtgtctgagcagcag
ttctggcccgttgagctggtccagacgaagcctctcagggatgggctggggcctgggccg
ggcttcgctcaggcagcgtttgaggcagccccagcagggtcctcctggggccttcctccc
tttgaactgaggtggcgggcgggcgcacggtcttctgcgctatctagactaggggcggcc
atctccatggccacggccgtgaatgggtcctgcgccggcaggtcgcgggacatactgtgg
cgcgttctgggctggaggatagttgcaagtattgtttggtcagtgctccttctacccatc
tgcactacattatttatactttttagcagcattgatttgtttcatcctatacagtggctg
tctgattctttcagtgacctgtatagttcctatgtaatcttttacctcctgctgctgtca
gtggtaataataataataagtattttcaatgtggagttctatacagttgtgccttccatt
ccctgctccagactagctctgatagggaagatcattcatcctcagcaactcatgcactca
tttattcatgctgcaatgggaatggtgatggcctggtgtgctgcagtgataacccagggc
cagtacagttttcttgtgattccctgcactggtaccaacagctttggtagccctgttgtg
caaacctgcttaaatgaatatcatcttttttttctactggctggagcatttatgggctat
agctatagcctcctgtattttgttaacaacatgaactatcttccatttcccatcatacag
caatacaagtttttgcgttttaggagatctctgctcttactagttaaacacagttgtgtg
gaatcactgttcctggttagaaatttctgcattttatattacttcattggccatattccc
aaagcttggattagcactgctatgaaccttcacatagatgagcaggttcataggccactt
gacacagtgagtggcctcttaaacctctcattactctaccatgtctggctgtgtggtgtc
tttctcctgacgacttggtatatctcatggatactcttcaaaatctatgccacagaggct
catgtgtttcctgttcaaccaccatttgcagaagggtcagatgagtgccttccgaaagtg
ttaaacagcaatcctccgcccatcataaaatatttagccttgcaggacctgatgttgctt
tctcagtattcgccttcacgaagacaagaagtttttagccttagccaaccaggtggacat
ccccacaattggacagccatttcaatggggtgtttgaatcttttaaacggtatgactcag
aagctggttctctatcaagaagctgctgctacgaatgggagagtgtcttcatcttaccca
gtggaacctaagaaatttagttctccagaagaaactacttttcaaacaccaaagtctagc
cagatgcctcggccttcagtgccaccattagttaaaacatcactgttttcttcaaaatta
tctacacctgatgttgcgagtccccctgggatcccatttggctctagtgtaatgcatcgg
atggctggaatttttgatgtaaatacctgctatgggtcaccgcaaagtcctcagctaata
agaagagggccaagattatggacatctgcttctgatcagcaaatgactgaattttctaat
ccttctccatctacctctattagtgctgagggtaagacagtgagacaacccaatgtgatt
tattcatggattcagaataaacgtgaacagattaagaatttcttgtcaaaacgagtgctg
ataatgtatttttttagtaagcatccagaggcctccattcaggctgttttttcagatgcc
caaatgcacatttgggcattagaaggtctgtcgcacttagtagcagcatcatatacagag
gatagatttggagttgtccagactacactaccagctatccttaatactttgttgatgctg
caagaggcagtcgacaagtactttaagcttcctcatgcttccagtaaaccaccccggatt
tcaggaagccttgtggacacttcatataaaacattaagatttgcattcagagcatcacta
aaaactgctatctatagaataactactacatttggtgaacatctgaatgctgtgcaagca
tctgcagaacatcagaaaagacttcaacagttcttggagttcaaagaatag
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