Callithrix jacchus (white-tufted-ear marmoset): 100385252
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Entry
100385252 CDS
T03264
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100385252 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100385252 (MYO5C)
04131 Membrane trafficking [BR:
cjc04131
]
100385252 (MYO5C)
03029 Mitochondrial biogenesis [BR:
cjc03029
]
100385252 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cjc04812
]
100385252 (MYO5C)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
100385252 (MYO5C)
mRNA cycle factors
P-body specific factors
100385252 (MYO5C)
Membrane trafficking [BR:
cjc04131
]
Others
Actin-binding proteins
Myosins
100385252 (MYO5C)
Mitochondrial biogenesis [BR:
cjc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
100385252 (MYO5C)
Cytoskeleton proteins [BR:
cjc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
100385252 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Csm1_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
100385252
NCBI-ProteinID:
XP_002753542
Ensembl:
ENSCJAG00000000926
UniProt:
U3BDP9
LinkDB
All DBs
Position
10:complement(35691442..35797828)
Genome browser
AA seq
1742 aa
AA seq
DB search
MAVAELYTQYNRVWIPDPEEVWKSAEIAKDYRVGDKILRLLLEDGTELDYSVDPESLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSGSNTHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTRMGGNTVIEGVNDQ
AEMVETQKTFTLLGFKEDFQMDVFKILAAILHLGNVQIAAVGSERSSISEDDHHLEVFCE
LLGLESGRVAQWLCNRRIVTSSETVVKPMTRPQAVNARDALAKKIYAHLFDFIVESINQA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKENI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNPLFEKPR
MSNTSFVIQHFADKVEYKCEGFLEKNRDTVYDMLVEILRASKFHLCASFFQENQVPPSPF
SSMITVKSAKQVIKPNSKHFRTTVGSKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMTKQELSFSDKKEVCKAV
LHRFIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQSCVMIQKHIRGWLQRKKFLRER
RAALIIQQYFRGQQTVRKAITAMALKEAWAAIIIQKHCRGYLVCSLYRLIRVATITIQAY
TRGFLARRRYRKMLEEHKAVILQKYARAWLARRRFQSIRRFVLNIQLTYRVQRLQKKLED
QNKENHGLVEKLTSLAALRAGDVEKIQKLETELERAATHRQHYEERGKRYRGTVEEKLAK
LQKHNSELETEKEKIQLKLQEKTEELKEKMDNLTKQLFDDVQKEERQRMLLEKSFELKTQ
DYEKQIQSLKEEIKALNDEKMQLQHLVEEGRITSDGLKAEVARLSSQAKTISEFEKEIEL
LQAQKIDVEKHVQLQKREMREKMSEITKQLLESYDIEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHE
VTRLTSENMMIPDFKQQISELEKQKQDLEIRLNEQAEKMKGKLEELSNQLNRSQEEEGTQ
RKAIEAQNEIHTKEKEKLIDKIQAMQEASEHLKKQFETESEVKSNFRQEASRLTLENRDL
EEELDMKDRVIKKLQDQVKMLSKTVGKANDVYSSSGPKEYLGMLQYKREDEVKLIQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSTINGIKQVVKEHLEDFEM
LSFWLSNTCHFLNCLKQYSGEEEFMKHNSPQQNKNCLNNFDLSEYRQILSDVAIRIYHQF
IIVMENNIQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSVLQQLSYFYS
TMCQNGLDPELVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDK
NLQNSLAKETLEPLSQAAWLLQVKKTTDSDAKEIYERCTSLSTVQIIKILNSYTPIDDFE
KRVTPSFVRKVQALLSSREDSSQLMLDTKYLFQVTFPFTPSPHALEMIQIPSSFKLGFLN
RL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctgtacacgcagtacaacagggtttggattcctgatcctgaagaa
gtttggaagtctgctgaaatagccaaggactacagagttggtgacaagatcctgcggctc
ctgctggaggatggaacggagctggattattccgtcgatccagaatctctgcctccgctt
cggaatcctgacatccttgtgggcgagaatgacctcacggccctcagctatctccacgag
cccgcagtgctccacaacctcagaatccgctttgcagaatccaagcttatttacacctac
agtggaatcattttggtggccatgaatccttacaagcagctgccgatatacggagatgcc
atcatccacgcctacagcgggcagaacatgggtgatatggacccacacatatttgctgtg
gcagaagaggcatataagcagatggccagaaacaacagaaaccagtccatcattgtaagt
ggggagtcaggtgctgggaagacagtgtcagctcgctatgccatgaggtactttgccacc
gtcagcaaatcaggcagcaacactcacgtggaggacaaggtcctagcgtccaaccccatc
accgaggctgtcggaaatgccaagaccacacgcaatgacaatagcagtcggtttggaaaa
tacacagaaatcagttttgatgagcgaaatcagattataggagccaacatgagaacttac
ctcctggagaaatccagagttgtctttcaatcggaaaatgaacgaaattaccacattttc
tatcagctttgtgcatctgcacagcagtcagaatttaaacatcttaaattgggcagtgct
gaagaatttaattatacaagaatgggaggtaatactgtcattgaaggtgtgaatgatcaa
gctgaaatggtcgaaactcagaagacctttacgcttctgggtttcaaggaggattttcag
atggatgtttttaaaatcctggcggccatcctacatctgggcaacgtgcagatcgccgcg
gtgggcagcgagaggtcctccattagtgaggatgaccatcacctggaggtgttctgtgag
ctcctgggtcttgagagtggcagagtcgctcagtggctgtgcaatcgcagaattgtcaca
agctctgagacagtggtgaaacccatgaccaggcctcaggctgtcaacgccagggatgca
ctggccaagaagatctatgctcacctgtttgacttcattgtggagagcattaaccaagcg
ttgcagttttcaggcaagcagcacacttttattggtgttttggacatttatggttttgaa
acctttgatgtgaacagctttgaacaattttgcatcaattatgctaatgaaaaactgcaa
caacagtttaacatgcatgtcttcaaactggaacaagaagaatacatgaaggaaaatatc
ccttggactctgatagatttctatgacaatcaaccagttattgacctgattgaagcaaaa
atgggaattttggagttattggatgaagaatgcttgttaccacatggaactgatgaaaac
tggcttcaaaagctgtataataattttgtcaacaagaatcctttgtttgaaaagcctaga
atgtcaaacacatccttcgtcatccagcactttgccgataaggtagaatataaatgtgaa
ggtttccttgagaaaaacagagacaccgtctatgacatgctggttgaaatcctgagagca
agcaagtttcatctctgtgccagcttttttcaagaaaatcaagttcctccttctcctttt
agttcgatgattacggttaaatctgccaagcaagtcatcaagccaaacagcaagcacttc
cggaccaccgtggggagcaagttccgcagctctctgtacttgctcatggagaccctcaat
gcgacgacaccgcactacgttcgatgcattaagccaaatgatgagaagttaccctttgaa
tttgactccaaaagaattgttcagcagctgcgagcctgcggtgtgctagaaacgattcgc
attagtgcacagagctacccttccaggtggacatacatagagttctacagccgctacagc
attctcatgaccaagcaagagctttccttcagcgataaaaaggaggtgtgcaaggctgtt
ttacacagattcatccaggattctaatcagtaccagtttggtaaaaccaaaattttcttc
agagccggacaagtggcttatttagagaaacttcgactggataaactgcggcagagttgt
gtgatgatacaaaagcacattcgtggctggctccagaggaaaaaattcctccgggagaga
cgagccgccctgataatccagcagtacttccggggtcagcaaaccgtgaggaaagctatt
actgcaatggccttaaaagaagcctgggcagccataatcattcagaagcactgccgtgga
tatcttgtttgcagtctgtatcggctgattcgcgtggctaccatcaccatccaggcctac
acccgaggattcctggcaaggaggaggtatcgaaagatgctggaagaacacaaggccgtg
atcctgcagaaatatgcacgggcatggctggccagacgcagattccagagtatccgacga
ttcgtgctcaacattcagcttacttacagggtccagcgtttgcagaaaaagttggaagat
cagaacaaagaaaaccatgggctggtggagaagctgaccagcctggctgctcttcgagct
ggggatgtggaaaagattcagaagctggaaacagagctagaaagagcagccacccacagg
cagcattacgaggagagggggaagagatacaggggtaccgtggaagagaaattggcaaag
cttcagaagcataattcagaactggaaacagagaaagaaaaaatacagctgaagcttcaa
gagaagactgaagagttgaaagaaaaaatggacaacctcaccaagcagctctttgatgat
gtacaaaaggaagaacgacaaagaatgcttcttgaaaaaagttttgaactgaaaacacaa
gactatgagaagcagattcagtctttgaaagaagaaattaaagctcttaatgatgagaag
atgcaactccaacacctggtggaggaggggcgcatcacttctgatggcttgaaggcggaa
gtggcccgcctgagctcgcaggccaagacaatctcagagttcgaaaaagagatagaacta
cttcaggcacagaagatagacgtggagaaacatgtacagttacaaaaacgggaaatgaga
gaaaagatgtcagagatcaccaaacaacttcttgaaagctatgacattgaagatgtaaga
agcaggctctctgtggaagatttggaacatttaaatgaggatggagaactctggtttgct
tatgaaggactaaagaaagcaacacgtgttttggagagccattttcagtctcagaaggat
tgctatgaaaaggagattgaagctttgaacttcaaagtggtgcatctaagtcaagaaatc
aaccacctgcagaagttattcagagaagaaaatgacatcaatgaaagcatccgtcatgaa
gttaccaggctaacatcagagaacatgatgatcccagactttaaacagcaaatttcagaa
ctagagaagcagaagcaagatcttgaaatccgcctgaatgaacaagctgagaaaatgaaa
ggaaaactagaagaattgtctaatcagttaaatcgcagtcaagaggaggaaggaacacaa
agaaaggccatagaagcccaaaatgaaatacataccaaagagaaggagaaactgattgat
aagattcaagcaatgcaggaggccagcgagcacttgaagaaacaatttgaaactgaaagt
gaagtcaagagtaacttccggcaggaagcatctcggctcactttggaaaacagggatctt
gaagaagaattagacatgaaagacagagtgattaaaaagctacaagatcaagttaagatg
ctaagcaagacagttggaaaagccaatgatgtgtactcatcctcaggacccaaggagtac
ctaggaatgctgcaatacaagagagaagacgaggtcaagctcattcagaacctcattctt
gacttgaagccccgtggtgtggtggtgaacatgatccccgggctcccggctcacatcctg
ttcatgtgtgtacgctacgcagactctctaaatgatgccaacatgctgaagtccctcatg
aacagcaccattaatggcatcaagcaggtggttaaggaacatttagaagactttgagatg
ctgtctttttggctttccaacacttgtcatttcctcaattgcctgaagcagtacagcgga
gaagaggaattcatgaagcataatagtccacaacagaataagaactgcttgaacaatttt
gacctttcagaatacagacagattctcagtgatgtggctatacgaatatatcatcaattt
attattgtaatggaaaataatatccaaccaataatagtgccggggatgctggagtatgag
agcctgcagggcatttccggcctgaagcccacgggcttccggaagcgctcctccagcata
gacgacacggacgcctataccatgacctccgtcctgcagcagctgagctacttctacagc
accatgtgccagaacggcctggacccagagctcgtgaggcaggcggtgaagcagctcttc
ttcttgatcggggcggtcacgctgaacagcctttttctgcgcaaggacatgtgctcctgc
agaaaagggatgcagatcaggtgcaatatcagctacttagaagaatggcttaaagataag
aatttgcagaacagcttagcaaaggaaactttggagcccctctctcaggcagcctggttg
cttcaggtcaagaagaccacagacagcgatgccaaagagatctacgaacgctgcacctca
ctgtctactgtgcagatcataaagatccttaattcatacacacctatagatgactttgag
aagagagtaactccatcctttgttcgcaaagtacaggctctcttaagtagccgggaggat
tcatcacagctgatgttggataccaaatatctctttcaagtcacatttccctttaccccc
tctccacatgctctcgaaatgattcagatccctagcagtttcaagctcggctttctaaat
aggttatag
DBGET
integrated database retrieval system
