Callithrix jacchus (white-tufted-ear marmoset): 100385337
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Entry
100385337 CDS
T03264
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjc03021
]
100385337 (AFF2)
Transcription machinery [BR:
cjc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100385337 (AFF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
100385337
NCBI-ProteinID:
XP_035144783
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All DBs
Position
X:140454142..140945075
Genome browser
AA seq
1305 aa
AA seq
DB search
MDLFDFFRDWDLEQQCHYEQDRSALKKREWERRNQEVQQEEDLFSSGFDLFGEPYKVAEY
TNKGDALANRVQNTLGNYDEMKDLLTNHSNQNHLVGIPKNSVPQTPINKNETSFFPEQKN
RIIPPHQDNTHPSAPMPPPSVVILNSTLIHSNRKSKPEWSRDSHNPSTVLASQASGQPNK
MQTLTQDQSQAKLEDLFVYPAEEPQIGEVEESNPSAKEESNAKSSGEDAFKEIFQSNSPE
ESEFAVQAPGSPLVASSLLAPSSGLSVQNFPPGLYCKTSMGQQKPTAYVRPMDGQDQAPD
ISPTLKPSIEFENSFGNLSFGTLLDGKPSAASSKTKLPKFTILQTSEVSLPSDPSCVEEI
LREMTHSWPTPLTAMHTAGHSEQNTFSIPGQESQHLTPGFTLQKWNDPTTRASTKMLEDD
LKLSSDEDDLEPVKTLTTQCTATELYQAVEKAKPRNNPVNSPLATPQPPPAVQASGGSGS
SSESESSSESDSDTESSTTDSESNEAPRVATPEPEPPSTNKWQLDKWLNKVTSQNKSFIC
GQNETPMETISLPPPIIQPMEVQMKVKTNASQVPAEPKERPLLSLIREKARPRPTQKTPE
TKALKHKLSASSETVSQRTVGKKQPKKVEKNTSIDEFTWPKPNITSSTPKEKESVELPDP
PRGRNKATAHKPAPRKEPRPNIPLATEKKKYRGPGKIVPKSREFIETDSSTSDSNTDQEE
TLQIKVLPPCIVSGGHTAKSKDACGAGLTLSTLMSNSGGNNNLSISNEQPAFSPTPVMQT
EILSPLRDHENMKNLWVKIDLDLLSRVPGHNSLHAAPSKPDHKETATKPKRQTAVAAVEK
PAPKGKRKHKPTEVAEKIPEKKQRLEEATTICLLPPCISPAPPHKPPNTRENNSSRRANR
RKEEKLFPPPLSPLPEDPPRRRNVSGSNGPFGQDKNIAMTGQITSTKPKRTEGKFCATFK
GISVNEGETPKKAASATVTVTNTAIATATVTTTAIVTTTVTATATATATTTTTTTTISTV
TSTITTGLMDSSHLEMTSWAALPLLSSSSTNVRRPKLTFDDSVHNADYYMQEAKKLKHKA
DALFEKFGKAVNYADAALSFTECGNAMERDPLEAKSPYTMYSETVELLRYAMRLKNFASP
LASDGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKQNASKVAQIPSPWVGN
GKNTPSPVSLNNVSPINAMGNCNNGPVTIPQRIHHMAASHVNITSNVLRGYEHWDMADKL
TRENKEFFGDLDTLMGPLTQHSSMTNLVRYVRQGLCWLRIDAHLL
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggatctattcgactttttcagagactgggacttggagcagcagtgccactatgaacaa
gaccgtagtgcacttaagaaaagggaatgggagcggaggaatcaagaagtccagcaagaa
gaagatctcttttcttcaggctttgatctttttggagagccatacaaggtagctgaatat
acaaacaaaggtgatgcacttgccaaccgcgtccagaacacgcttggaaactatgatgaa
atgaaggatttgctaactaaccattctaatcagaatcatctagtgggaattccaaagaat
tctgtgccccagactcccatcaacaaaaatgaaacaagcttttttccagaacagaagaac
aggataattccacctcaccaggataacacccacccttcagcaccaatgcctccaccttct
gttgtgatactgaattcaactctaatacacagcaacagaaaatcaaaacctgaatggtca
cgtgatagtcataaccctagcacagtactggcaagccaggccagtggtcagccaaacaag
atgcagactttgacacaggaccagtctcaagccaaactggaagacttatttgtctaccca
gctgaagagccccagattggagaagttgaagagtcaaacccatctgcaaaggaagagagc
aatgctaaatccagtggagaagatgctttcaaggaaatctttcaatccaattcaccagaa
gaatctgaatttgccgtgcaagctcctgggtctcccctagtggcatcctctttgttagct
cccagcagtggcctttcagttcaaaacttcccaccagggctttactgcaaaacaagcatg
gggcagcaaaagccaactgcatacgtcagacccatggatggccaggaccaggcaccagac
atctctccgacactgaaaccttcaattgaatttgagaacagctttgggaatctgtcattt
ggaacactcttggatggaaaacccagtgcagccagttcaaagactaaactgccaaagttc
accattctccaaacaagtgaagtaagccttcccagtgatccaagctgtgttgaagaaatc
ttgcgggagatgacccattcctggcctactcctctcactgccatgcatactgctggacac
tctgagcagaacacattttccatcccaggacaggaatcgcagcatctgaccccaggattc
accttacaaaagtggaatgacccaaccaccagagcttctacaaagatgcttgaggatgac
ctgaagctgagcagtgatgaagatgaccttgagcctgtgaagaccttgactactcagtgc
actgccactgagctctatcaggctgttgaaaaggcaaaaccgaggaataatcctgtgaac
tcacctttggccactccccagcccccacctgcagtgcaagccagcgggggttctggcagc
tccagcgaatcagagagcagctctgagtcagattcggacactgaaagcagcaccactgac
agcgaatctaatgaggcacctcgtgtggccactccagagcctgagccaccttcaaccaac
aagtggcaactggataaatggcttaacaaagtgacatcccagaacaagtcttttatttgt
ggccaaaatgaaacaccgatggagacaatttctctgcctcctccaatcatccagccaatg
gaagtccagatgaaagtgaagacaaatgccagtcaggtcccggctgaacccaaagaaagg
cctctcctcagtctcattagggagaaagcccgtccgcggcccactcagaaaactccagaa
acaaaggctttgaagcataagttgtcagcaagtagtgagacagtgtctcaaaggacagtt
gggaaaaaacagcccaaaaaggttgagaagaacaccagcattgacgagtttacctggccc
aaaccaaatattaccagcagcactcccaaagaaaaagaaagtgtggagcttcctgaccca
ccaagaggccgcaacaaagccactgcccacaaaccagcccctaggaaagaaccaagacct
aacatccccttggctaccgagaagaagaagtacagagggcctggcaagattgtgccaaag
tctcgggaattcatcgaaacagattcatctacatctgactccaacacagatcaggaagag
accctgcaaatcaaagtcctgcctccgtgcattgtttctggaggtcatactgccaaatcc
aaggacgcctgtggtgccggcctgaccctcagcaccttaatgagcaacagtggcggcaac
aacaacttatccatcagtaacgaacagccagcattttcacccactcctgtcatgcaaact
gagattctgtcccctctgcgagatcatgaaaacatgaaaaacctctgggtgaagattgac
cttgacttactctctagagtacctggccacaactccctccatgcagcaccttccaagcca
gaccacaaggagactgccacaaaacccaagcgtcagacagctgtcgctgctgtggagaaa
ccagccccaaagggcaagcgtaagcacaagccaacagaagttgcagagaagattccagag
aagaagcagcgcctggaggaggccacgactatctgcttgctccctccttgcatctcacca
gccccacctcacaagcctcccaacactagagaaaataattcatccaggagagcaaacaga
agaaaggaagaaaaactatttcctcctccactttccccactgccagaggaccctccacgc
cgcagaaatgtcagtggcagtaatggtccctttggacaagacaaaaacatcgccatgact
ggacaaatcacatctaccaaacctaagagaaccgaaggcaaattctgtgctactttcaaa
gggatatcggtaaatgagggagaaactccgaaaaaggcagcctctgccactgtcactgtc
accaacactgctattgccactgccactgtcactactactgccattgtcaccaccactgtc
acagctactgccaccgccacggccaccaccacaactactaccactaccatttccaccgtc
acctctaccatcactactggcctcatggatagcagtcacctggagatgacgtcctgggcg
gctctgccccttctttccagcagcagcactaatgtccggagacccaagctcacttttgat
gactcggttcacaatgctgattattacatgcaagaggctaagaagctgaagcacaaagct
gatgcactgttcgagaaatttggcaaagccgtgaattacgccgatgccgccctctccttc
actgaatgtggcaatgccatggaacgcgaccctctggaagcaaagtcgccatacaccatg
tactctgagactgtggagctcctaaggtatgcgatgaggctgaagaactttgcaagtccc
ttggcttcggatggggacaaaaagctagcagtactatgctaccgatgtttatcactcctc
tatttgaggatgtttaagctgaagaaggaccatgctatgaagtactccagatcactgatg
gaatattttaagcaaaatgcttcaaaagtcgcacagataccatctccatgggtaggcaat
ggaaagaacactccatctccagtgtctctcaacaacgtctcccccatcaacgcaatggga
aactgtaacaacggcccagtcaccattccccagcgcattcaccacatggctgccagccac
gtcaacatcactagcaatgtgttacggggctatgaacactgggatatggccgacaaactg
acaagagaaaacaaagaattctttggtgatctggacacgctgatgggacctctgacccag
cacagcagcatgaccaatcttgtccgctacgttcgccaaggactgtgttggctgcgcatc
gatgcccacttgttgtag
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