Callithrix jacchus (white-tufted-ear marmoset): 100385404
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Entry
100385404 CDS
T03264
Symbol
SLIT3
Name
(RefSeq) slit homolog 3 protein isoform X1
KO
K06850
slit 3
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100385404 (SLIT3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cjc00536
]
100385404 (SLIT3)
Glycosaminoglycan binding proteins [BR:
cjc00536
]
Heparan sulfate / Heparin
Axon guidance molecules
100385404 (SLIT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
hEGF
Laminin_G_2
LRRNT
LRR_9
Laminin_G_1
EGF_TEN
LRRCT
LRR_14
LRR_EndoS
JAG1-like_EGF2
EGF_3
LRR_NXF1-5
EGF_Teneurin
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
100385404
NCBI-ProteinID:
XP_035147993
UniProt:
A0A8J8Y4L8
LinkDB
All DBs
Position
2:complement(29594764..30236127)
Genome browser
AA seq
1523 aa
AA seq
DB search
MAPGRTGVCAAVRARLALALALASVLSWPPAVACPTKCTCSAASVDCHGLGLRAVPRGIP
RNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNK
LQVLPELLFQSTPKLSRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL
RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT
LCMAPVHLRGFNVADVQKKEYVCPGPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLTE
IPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL
VLYGNKITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISK
GLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKS
KKFRCSGSEDYRSRFSSECFMDLMCPEKCRCEGTIVDCSNQKLARVPSHLPEYVTDLRLN
DNEISVLEATGIFKKLPNLRKINLSNNKIKELREGAFDGAASVQELMLTGNQLETVHGRM
FRGLSALKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINL
LSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGNDESSCQ
LSPRCPEQCTCVDTVVRCSNKGLRTLPKGMPKDVTELYLEGNHLTAVPRELSALRHLTLI
DLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPE
GSFSDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPEPMADRLLLTTPT
HRFQCKGPVDINIAAKCNACLSGPCKNNGTCTQDPVELYRCACPYSYKGKDCTVPINTCI
QNPCQHGGTCHLSDSHKEGFSCSCPLGFEGQRCEINPDDCEDNDCENNATCVDGINNYVC
VCPPNYTGELCDEVIDHCVPELNLCQHEAKCITLDKGFRCECVPGYSGKLCETDNDDCVA
HKCRHGAQCVDAVNGYTCTCPQGFSGLFCEHPPPMVLLQTSPCDQYECQNGAQCIVVQQE
PTCRCPPGFAGPRCEKLITVNFVGKDSYVELASAKVRPQANISLQVATDKDNGILLYKGD
NDPLALELYQGHVRLVYDSLSSPPTTVYSVETVNDGQFHSVELVMLNQSLNLVVDKGTPK
SLGKLQKQPAVGINSPLYLGGIPTSTGLSALRQGTDRPLGGFHGCIHEVRINNELQDFKA
LPPQSLGVSPGCKSCTVCKHGLCRPVEKDSVVCECHPGWTGPLCDQEARDPCLSHSCNHG
KCVATGTSYMCKCAEGYGGALCDHKNDSTNACSAFKCHHGQCHISDRGEPYCLCQPSFSG
EHCQQANPCLGQVVREVIRRQKGYASCATASKVPIMECHGGCGPQCCQPTRSKRRKYVFQ
CTDGSSFVEEVERHLECGCLVCS
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgggcggacaggggtctgcgccgcggtgcgcgcccgcctggcgctggccttg
gctctggcgagcgtcctgagctggcccccagccgttgcctgccccaccaagtgtacctgc
tccgccgccagcgtggactgccacgggctgggcctccgcgcggttcctcggggcatcccc
cgcaacgccgagcgccttgacctggacagaaataatatcaccaggatcaccaagatggac
ttcgctgggctcaagaacctccgagtcttgcatctggaagacaaccaggtcagcatcatt
gagagaggcgccttccaggacctgaagcagctggagcgactgcgcctgaacaagaataag
ctccaagtccttccagaattgcttttccagagcactccgaagctcagcagactagatttg
agtgaaaaccagatccaggggatcccaaggaaggcgttccgcggcattaccgacgtgaag
aacctgcaactggacaacaaccacatcagctgcattgaagatggagccttccgagcgctg
cgcgatttggagatcctcactctcaacaacaacaacatcagtcggatcctggtcaccagc
tttaaccacatgccgaagatccgaactctgcgcctccactccaaccacctgtactgcgac
tgccacctggcctggctctcagattggctgcgacagcgacggacagttggccagttcaca
ctctgcatggctcctgttcacttgaggggcttcaatgtggcagatgtgcagaagaaggag
tacgtatgcccaggcccccactcggagcccccatcctgcaacgccaactccatctcctgc
ccctcgccctgtacgtgcagcaataatattgtggactgtcgaggaaagggcttgacggag
attcctgccaacttgccggagggcatcgttgaaatacgcctagaacagaactccatcaaa
tccatccctgcaggagccttcacccagtacaagaaactgaagcgaatagacatcagcaag
aatcagatatcagatattgctccagatgccttccagggcctgaagtcactcacatcgctg
gtcctctatgggaacaagatcacggagattgccaagggactgtttgatgggctggtgtcc
ctacagctgctcctcctcaatgccaacaagatcaattgcctgcgggtgaacacgtttcaa
gacctacagaacctcaacttgctctccctgtatgacaacaagctgcagaccatcagcaag
gggctcttcgcccccctgcagtccatccagacgctccacttagcccaaaacccatttgtg
tgcgactgccacttgaagtggctggctgactacctccaggacaaccccattgagacaagc
ggggcccgctgcagcagccctcgccgactcgccaacaagcgcatcagccagatcaagagc
aagaagttccgctgctcaggctccgaggattaccgaagcaggttcagcagcgagtgcttc
atggacctcatgtgccctgagaagtgccgctgcgagggcactatcgtggactgctccaac
cagaagctggcccgcgtcccaagccaccttcctgaatacgtcacggacctgcgactgaat
gacaatgagatatctgttctagaggccactggtatcttcaagaagttgcccaacttgcgg
aaaataaacctgagtaacaataagatcaaggagttgcgagaaggtgctttcgatggagcg
gccagcgtgcaggagctgatgctgacgggaaaccagctggagactgtgcacggacgcatg
ttccgcggcctcagtgccctcaaaaccttgatgctgaggagtaacttgatcagctgtgtg
aataatgacacctttgccggcctgagttcagtgagactgctgtccctctatgacaatcgg
atcaccaccatcacccctggagccttcaccacgcttgtctccctgtccaccataaacctc
ctgtccaaccccttcaactgcaactgccacctggcctggctgggcaagtggttgaggaag
aggcggatcgtcagcggaaaccctaggtgccagaagccgtttttcctcaaggagatcccc
atccaggatgtggccatccaggacttcacctgtgacggcaacgatgagagtagctgccag
ctgagcccgcgctgcccggagcagtgcacctgcgtggacaccgtggtgcgatgcagcaac
aaaggactccgcaccctccccaaaggcatgcccaaggacgtgaccgaactgtacctggaa
ggaaaccacctaacagctgtgcccagagagctgtctgccctccgacacctgacgcttatt
gacctgagcaacaacagcatcagcatgctgaccaattacaccttcagtaacatgtctcac
ctctccactctgatcctgagctacaaccggctgaggtgcatccctgtccacgccttcaac
gggctgcggtccctgcgagtgctaaccctccatggcaacgacatttccagcgttcctgaa
ggctccttcagcgacctcacatctctttcccatctggcgctgggaaccaaccctctccac
tgtgactgcagtcttcggtggctgtcggagtgggtgaaggcggggtacaaggagcctggc
attgcccgctgcagtagccctgagcccatggccgacagactcttgctcaccaccccaacc
caccgcttccagtgcaaagggccagtggacatcaacatcgcggccaaatgcaatgcctgc
ctctctggcccgtgcaagaacaacgggacgtgcacccaggaccctgtggagctgtaccgc
tgtgcctgcccctacagctacaagggcaaggactgcactgtgcccatcaacacctgcatc
cagaacccctgtcagcatggaggtacctgccacctgagtgacagccacaaggaagggttc
agctgctcctgccctctgggctttgagggacagcggtgtgagatcaacccagatgactgt
gaggacaacgactgcgaaaacaatgccacctgtgtggacgggatcaacaactatgtgtgt
gtctgcccgccaaactacacaggtgagctgtgtgacgaggtgatcgaccactgtgtgcct
gagctgaacctctgtcagcatgaggccaagtgcatcaccctggacaaaggattcagatgt
gagtgtgtccctggctacagcgggaagctctgtgagacagacaatgatgactgtgtggcc
cacaagtgccggcatggggcccagtgtgtggacgcagtcaatggctacacatgcacctgc
ccccagggcttcagtggactcttctgcgagcaccccccacccatggtcctgctacagacc
agcccgtgtgaccagtacgagtgccagaatggggcccagtgcatcgtggtgcagcaggaa
cccacctgccgctgcccaccaggcttcgccggccccagatgcgagaagctcatcaccgtc
aactttgtgggcaaggactcctatgtggaactggcctccgccaaggtccgaccccaggcc
aacatctccctgcaggtggccaccgacaaggacaacggcatccttctctataaaggagac
aatgaccccctggcgctggagctgtaccagggccacgtgcggctggtctacgacagcctg
agttcccctccaaccacagtgtacagtgtggagacagtgaatgacgggcagtttcacagt
gtggagctggtgatgttaaaccagtccttgaacctggtagtggacaaaggaacccccaag
agcctggggaagctccagaagcagccagcagtgggcatcaacagccccctctaccttgga
ggcatccccacctccaccggcctctccgccttgcgccagggcacagaccggcctctaggc
ggcttccacggctgtatccacgaggtgcgcatcaacaacgagctgcaggattttaaggcc
ctcccgccgcaatcattgggagtctcaccaggctgcaagtcctgcactgtgtgcaagcat
ggcctgtgccgccccgtggagaaggacagcgtggtgtgtgagtgccacccaggctggaca
ggcccactctgcgaccaggaggcccgggacccctgcctcagccacagctgcaaccatgga
aaatgtgtggcaaccgggacctcatacatgtgcaagtgtgctgagggctatggaggggcc
ttgtgtgaccacaagaatgactccaccaacgcctgctcagccttcaagtgtcaccatggg
cagtgccacatctcggaccgaggggagccctactgcctgtgccagcccagctttagcggg
gagcactgccaacaagcgaatccatgcctaggacaggtagtccgagaggtgatccgccgc
cagaaaggttatgcatcatgcgcaacagcctccaaggtgcccatcatggaatgtcacggg
ggctgcgggccccagtgctgccagcccacccgcagcaagcgtcggaaatacgtcttccag
tgcacggacggctcctcattcgtggaagaggtggagagacacttagagtgcggctgcctc
gtgtgttcctaa
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integrated database retrieval system
