Callithrix jacchus (white-tufted-ear marmoset): 100385452
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Entry
100385452 CDS
T03264
Symbol
ACAN
Name
(RefSeq) aggrecan core protein isoform X1
KO
K06792
aggrecan 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cjc00535
]
100385452 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
cjc00536
]
100385452 (ACAN)
04091 Lectins [BR:
cjc04091
]
100385452 (ACAN)
Proteoglycans [BR:
cjc00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
100385452 (ACAN)
Glycosaminoglycan binding proteins [BR:
cjc00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
100385452 (ACAN)
Lectins [BR:
cjc04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
100385452 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
V-set
Sushi
hEGF
EGF_3
I-set
EGF_CA
EGF_2
Ig_3
ig
FXa_inhibition
Motif
Other DBs
NCBI-GeneID:
100385452
NCBI-ProteinID:
XP_035159640
Ensembl:
ENSCJAG00000012944
LinkDB
All DBs
Position
6:16264006..16336200
Genome browser
AA seq
2286 aa
AA seq
DB search
MTTLLWVFVTLRVITAAVSVEVSDHDNSLSVSIPQPSPMRVLLGTSLTIPCYFIDPMHPV
TTAPSTAPLAPRIKWSRVSKEKEVVLLVATEGRVRVNSAYQDKVSLPNYPAIPSDATLEI
QSLRSNDSGVYRCEVMHGIEDSEATMEVVVKGVVFHYRAISTRYTLDFDRAQRACLQNSA
IIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDKDEFPGVRTYGIRDTNE
TYDVYCFAEEMEGEVFYATSPEKFTFQEAANECRRLGARLATTGQLYLAWQSGMDMCSAG
WLADRSVRYPISKARPNCGGNLLGVRTVYLHANQTGYPDPSSRYDAICYTGEDFVDIPEN
FFGVGGEEDITIQTVTWPDVELPLPRNITEGEARGNVILTAKPIFDVSPSPLEPEEPFTF
APEIGATAFPEIENETAEASRPWAFPTPGLGPATAFTSEDLVVQVTAVPGAAEVPGQPHL
PGGVVFHYRPGPTRYSLTFEEAQQACLRTGAVIASPEQLQAAYEAGYEQCDAGWLRDQTV
RYPIVSPRTPCVGDKNSSPGVRTYGVRPSTETYDVYCYVDRLEGEVFFATRLEQFTFQEA
LDFCESHNATLATTGQLYAAWSLGLDKCYAGWLADGSLRYPIVTPRPACGGDKPGVRTVY
LYPNQTGLPDPLSRHHAFCFRGVSAAPSPGEEEGGTPTSPSGVEDWIVTQVVPGVAAVPM
GEETTAVLLGETTAVPEFTTEPENQTEWEPAYTPMGTSPLPGILPTWPPTGAATEESTEG
PSATEVPSASEEPSPSEEPFPSVEPFPSVGPSPSTEPSPSVEPFPSQEPPTSEEPSASEE
PYTPSTLVPSWTELPGSGEESGAPEVSGDFTGSGNASGHLDFSGQLSGDRASGLPSGDLD
SSGLTSTVGSGLPVESGLASGDGERIEWSSTPMVGELPSGGEILEGSASGAGDLSGLPSG
EVLETSASGVGDLSGLPSGEVLETSTSEVEDLSRLPSGREGLEISASGVGDLSGLSSAGE
VLETTASGVEDISGLPSGEVLETSTSGVGDLSGLPSGEVLETSTSGVGDLSGLPSGEVLE
TSTSGVGDLSGLPSGEVLETSTSGVGDLSGLPSGEVLETSTSGVGDLSGLPSGEVLETST
SGVGDLSGLPSGGEVLETSASGVEDISGLPSGEAVETSASGVEDVSELPSGEGLETSASG
VEDLSRLPSGEVLETSASGVGDLSGLPSVGEVPETSVSGVGDLSGLPSGEEGLETSAFGV
GTDLSGLPSGRESLETSASGAEDLSGLPSGKEDLVGSASGDLDLGKLPSGTLGSGQAPET
SGLPFGFSGEYSGVDLGSGPSSGLPDFSGLPSGFPTVSLVDSTLVEVVTASTGSELEGRG
TIGVSGAGEVSGLPFSELDISGGASGLPSGTELSGQASGSPDISGETSGLFGVSGQPSGF
PDISGGTSGVFEVSGQPSGFPDTSGETSGVTELSGVSSGQPGVSGEASGILYGTGQPFGI
TDLSGETSGVPDLSGQPSGLPELSGATSGIPGLVSGATSGSGESSGITFVDTSLVEVTPT
TFKEEEGLGSVDLSGLPSGEEDLSGKSGIVDVSGQFSGTVDSSRFTSQTPEFSGLPSGIA
EVSGEPSGAESGSSLPSGAYSGSGLPSGFPTVSLIDRTSVESVTQSPTAQEAGEGPSGII
ELSGAHSGAPDLSGDHSGFLDLSGLQSGLVEPSGEPPSTLYFSGDFASTTDISGEPSVAM
STSGEASGLPEVTLITSEFVEGVTEPTVSQELGQGPPVTHTPQLFESSGEASAAGDISGV
TLVLSGSGVEVSSVPESSSETSAYPEAGVEASTAHEASGEASGFPDLSETTSAFHEADLE
RSSGLEVSGSTLTFQEGKGSTAPEVSGESTTTDDVGTEASVLPSATPMASGDRTETSGDL
SDHTSGLGIVISTSPPESEWTQHTQRPAEAHLEIESSSLLYSGEETQTAKTATSPTDASI
PASPEWTGESESTVAAPARSCAEEPCGAGTCKETEGQVICLCPPGYTGEHCNIDIDECLP
SPCLNGATCLDAIDSFTCLCLPSYGGDLCEIDQEVCEEGWTKYQSHCYRHFPDRETWVDA
ERRCREQQSHLSSIVTPEEQDFVNNNAQDYQWIGLNDRTIEGDFRWSDGHPMQFENWRPN
QPDNFFAAGEDCVVMIWHEKGEWNDVPCNYHLPFTCKKGTVACGEPPAVEHARTFGQKKD
RYEINSLVRYQCTEGFVQRHVPTIRCQPSGHWEEPRITCTDPTTYKRRLQKRSSRHPRRS
RSSVPH
NT seq
6861 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactctgggtttttgtgactctgagggtcatcactgcagctgtctcagtg
gaagtttcagaccatgacaactcgctgagtgtgagcatcccccaaccgtccccgatgagg
gtcctcctcgggacctctctcaccatcccctgctatttcatcgaccccatgcaccctgta
accaccgccccctccaccgcccccctcgccccaagaatcaagtggagccgtgtttccaag
gagaaggaggtagtgctgctggtggccactgaagggcgcgtgcgggtcaacagtgcctac
caggataaggtctcgctgcccaactatcccgccatccctagcgacgccaccttggaaatc
cagagcctgcgctccaatgactctggggtctaccgctgcgaggtgatgcacggcatcgag
gacagtgaggctaccatggaggtcgtggtgaaaggcgttgtgttccattacagagccatt
tccacgcgctacacccttgacttcgacagggctcagcgggcctgcctgcagaacagtgcc
atcatcgccacacctgagcagctgcaggccgcctatgaagatggcttccaccagtgtgac
gccggctggctggccgatcagactgtcagatatcccatccacactccccgggaaggctgc
tatggagacaaggatgagtttcctggcgtgaggacatatggcatccgagacaccaatgag
acctatgacgtatattgcttcgccgaggagatggagggtgaagtcttttatgcaacatct
ccagagaagttcactttccaggaggcagccaatgagtgccggcggctgggtgcccggctc
gccaccacgggccagctctacctggcctggcagagcggcatggacatgtgcagcgctggc
tggctggccgaccgcagtgtgcgctaccccatctccaaggcccggcccaactgcgggggc
aacctcctgggtgtgaggaccgtctacctgcatgccaaccagacgggctaccccgacccc
tcatcccgctatgacgccatctgctacacaggtgaagactttgtggacatcccagaaaac
ttctttggagtagggggtgaggaggacatcaccatccagacggtgacctggcctgacgtg
gagctgccactgcctcgaaatattaccgagggtgaagcccgaggcaacgtgatccttact
gcaaagcccatcttcgatgtctcccccagtcctctggagcctgaggagcccttcacattt
gcccctgaaataggggccactgcctttcctgagattgagaatgagactgcagaggccagc
aggccctgggcctttcccacgcctggcctgggccctgccacagccttcaccagtgaggat
ctcgttgtgcaggtgactgctgtcccaggtgcagctgaggtccctgggcagccgcatttg
ccagggggagtcgtgttccactaccgcccgggacccacccgatactcgctgaccttcgag
gaggcgcagcaggcctgcctgcgcaccggggcggtcattgcctctccagagcagctccag
gccgcctacgaagctggctatgagcagtgtgacgccggctggctgcgggaccagactgtc
agataccccattgtgagcccacggaccccatgcgtgggtgacaagaacagcagcccagga
gtcaggacgtatggcgtgcgcccatcaacagagacctacgatgtttactgctatgtggac
agacttgagggggaggtgttcttcgccacacgccttgagcagttcaccttccaggaagca
ctggacttctgtgaatctcacaatgccacgctggccaccactggccagctctacgccgcc
tggagcctcggcctggacaagtgctatgccggctggctggccgacggcagcctccgctac
cccatcgtcaccccaagacctgcctgtggtggggacaagccaggcgtgagaaccgtctac
ctctaccctaaccagacgggcctcccggacccgctgtcccggcaccatgccttttgcttc
cgaggcgtttcagcagctccttctccaggagaagaagagggtggcacacccacatcaccc
tctggtgtggaggactggatcgtgacccaagtggtgcctggtgtggctgctgtccccatg
ggggaggagacaactgctgtactcttaggcgagactactgcagtcccagagttcaccact
gagccagaaaaccagacagaatgggaacccgcctacaccccaatgggcacatccccactg
ccagggatccttccgacttggcctcccactggcgcagcaacagaggaaagcacagaaggc
ccttctgcaactgaagtgccctctgcctcagaggaaccatccccctcagaggagccattc
ccctcggtggaaccattcccctcagtggggccatccccttcgacggagccgtccccctcg
gtggaaccattcccctcccaggagccacccacttcagaggaaccatcagcttcagaagag
ccatacacaccttcaaccctggtgcccagctggactgagcttccaggctctggggaagaa
tctggcgcccctgaagtcagtggtgacttcacaggcagtggaaatgcttcaggacacctt
gacttcagtgggcagctgtcaggggacagggcaagtggactgccctctggagaccttgac
tccagtggtcttacttccacagtgggctcaggcctgcctgtggaaagtggactggcctca
ggggatggagagagaattgaatggtccagcacacctatggttggtgaactgccctctgga
ggtgagatcctagagggctctgcctctggagctggggacctcagtggacttccttctgga
gaagttctagagacttctgcctctggagtaggagacctcagtggacttccttctggagaa
gttctagagacttctacctctgaagtagaagaccttagcagacttccttctggaagagaa
ggtctagagatttctgcgtctggagtaggggaccttagtggactttcttctgcaggagaa
gttctagagactactgcctctggagtagaggacattagtgggcttccttctggagaagtt
ctagagacttctacctctggagtaggagacctcagtgggcttccttctggagaagttcta
gagacttctacctctggagtaggagacctcagtgggcttccttctggagaagttctagag
acttctacctctggagtaggagacctcagtgggcttccttctggagaagttctagagact
tctacctctggagtaggagacctcagtgggcttccttctggagaagttctagagacttct
acctctggagtaggagacctcagtgggcttccttctggagaagttctagagacttctacc
tctggagtaggagacctcagtggacttccttctggaggagaagttctagagacttctgcc
tctggagtagaggacatcagtgggcttccttctggagaagctgtagagacttctgcctct
ggagtagaagatgtcagtgaacttccttcaggggaaggtctagagacctctgcttctggg
gtagaggacctcagcaggctcccttctggagaagttctagagacttctgcctctggagta
ggggacctcagtggacttccttctgtaggagaagttccagagacttctgtctctggagtt
ggggacctcagtggacttccttctggagaagaaggtctagagacctctgcttttggagta
gggactgacctcagtggacttccttctggaagggagagtctagagacttcagcttctgga
gctgaggatctcagtgggttgccttctggaaaagaagacttggtgggttcagcttctgga
gacttggacttgggtaaactgccttctggaactctaggaagtgggcaagctccagaaaca
agtggacttccctttggatttagtggcgagtattctggggtggaccttggaagtggccca
tcctctggcctgcctgactttagtggacttccatctggattcccaactgtctccctagtg
gattctacattggtagaagtggtcacagcctccactgggagtgaactggaagggagggga
accattggtgtcagtggtgcaggagaagtatctgggctgcctttcagtgagctggacatt
agtgggggagctagtggactcccttcgggaactgaactcagtggccaagcatctgggtct
cctgacatcagtggggaaacatctggactctttggtgtcagtggacagccctcagggttt
cctgacatcagtgggggaacatctggggtttttgaggttagtgggcagccatcagggttt
cctgacaccagtggggaaacatctggagtgactgagcttagcggggtgtcctctggacaa
ccaggtgttagtggagaagcatctggaatcctttatggcactggtcaaccatttggcata
accgacctgagtggagaaacatccggggtccctgatctcagcgggcagccttcagggttg
ccagagctcagtggggcaacgtcaggaatccctggactggtttctggtgccacgagtggc
agcggtgaatcttctggcattacatttgtggacaccagtttggtcgaagtgacccctaca
acgtttaaagaagaagaaggtttggggtctgtggacctcagtggactcccttctggagag
gaagatctgtcaggcaaatctgggatagtggatgtcagtggacagttttctggaactgtc
gattccagtaggtttacatcccagactccagaattcagtggcctaccaagtggcatagct
gaggtcagtggagaaccctctggagctgagagtgggagcagcctaccctcgggagcatat
tctggcagtggacttccatctggtttccccactgtctctcttatagacagaacttcggtg
gaatctgtaacccaatctccaacagcccaagaagcaggagaagggccttctggcattata
gaactcagtggtgcccattctggagcaccggacctgtctggggaccattctggatttctg
gacctaagtgggctgcagtctgggctggtagagcccagtggagagccaccaagtactctg
tattttagtggggattttgccagcaccactgatataagcggagaaccctctgtagccatg
agcaccagtggagaggcttcgggacttccagaagttactttaatcacttctgagtttgtg
gagggtgttactgaaccaacagtttctcaggaacttggacaggggccccctgtgacacac
acaccccagctttttgagtccagtggagaagcctctgcagctggggacattagtggagtt
accctggtgctctctggatctggagtagaagtgtcatctgtcccagaatctagcagtgag
acgtccgcctatcctgaggctggggtcgaggcatctactgcccatgaggccagcggagaa
gcttctgggttccctgatctgagtgaaaccacctctgcattccatgaagctgacctcgag
agatcctctggcctagaagtgagcggcagcactttgacttttcaagaaggcaaggggtca
actgccccagaagtgagcggcgaatccaccaccactgatgacgtggggacggaggcatca
gtcttgccttcggccactcccatggcttctggagacaggactgaaaccagcggagacctg
tctgatcacacctcggggctgggtattgtcatcagcaccagccccccagagtctgagtgg
acccagcatacccagcgccctgcagaggcacatctagaaattgagtcctcaagcctccta
tactcaggagaagagactcaaacagccaaaacagccacctccccaacagatgcttccatc
ccagcttctccagaatggacaggtgaatcagagtcaactgttgcagcccctgccaggtcc
tgtgcggaggagccctgtggtgctgggacctgcaaggagacagagggacaggtcatatgc
ctgtgcccccctggctacactggcgagcactgcaacatagacattgatgagtgcctccca
agcccttgtctgaatggagccacctgcctggatgccatcgactctttcacatgcttatgc
cttcccagctacggaggggacctgtgtgagatcgaccaggaggtatgtgaggagggctgg
accaagtaccagagccactgttaccgccacttcccggaccgcgagacctgggtggatgcg
gagcgccggtgtcgggagcagcagtcacacctgagcagcatcgtcacccccgaggagcag
gactttgtcaacaacaatgctcaagactaccagtggatcggcctgaatgacaggaccatt
gaaggggacttccgctggtcagatggacaccccatgcaatttgagaactggcgccccaac
cagcctgacaatttctttgccgccggagaggactgtgtggtgatgatctggcatgagaag
ggcgagtggaatgatgttccctgcaattatcacctgcccttcacgtgtaaaaaaggcaca
gtggcctgcggagaaccccctgcagtggagcatgccaggaccttcgggcagaagaaggac
cggtatgagatcaattccctggtgcggtaccagtgcacggaggggtttgtccagcgccac
gtgcccactatccggtgccagcccagcgggcactgggaggagcctcggatcacctgcaca
gaccccaccacctacaaacgcagactacagaagcgaagctcacggcaccctcggaggagc
cgctccagtgtgccccactga
DBGET
integrated database retrieval system
